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Similar articles for PubMed (Select 23320748)

1.

EnRICH: Extraction and Ranking using Integration and Criteria Heuristics.

Zhang X, Greenlee MH, Serb JM.

BMC Syst Biol. 2013 Jan 15;7:4. doi: 10.1186/1752-0509-7-4.

2.

Integrative systems biology approaches to identify and prioritize disease and drug candidate genes.

Kaimal V, Sardana D, Bardes EE, Gudivada RC, Chen J, Jegga AG.

Methods Mol Biol. 2011;700:241-59. doi: 10.1007/978-1-61737-954-3_16.

PMID:
21204038
3.

Disease gene identification by random walk on multigraphs merging heterogeneous genomic and phenotype data.

Li Y, Li J.

BMC Genomics. 2012;13 Suppl 7:S27. doi: 10.1186/1471-2164-13-S7-S27. Epub 2012 Dec 13.

4.

Candidate gene prioritization.

Masoudi-Nejad A, Meshkin A, Haji-Eghrari B, Bidkhori G.

Mol Genet Genomics. 2012 Sep;287(9):679-98. doi: 10.1007/s00438-012-0710-z. Epub 2012 Aug 15. Review.

PMID:
22893106
5.

Prioritizing disease candidate genes by a gene interconnectedness-based approach.

Hsu CL, Huang YH, Hsu CT, Yang UC.

BMC Genomics. 2011 Nov 30;12 Suppl 3:S25. doi: 10.1186/1471-2164-12-S3-S25. Epub 2011 Nov 30.

6.
7.

Gene prioritization through genomic data fusion.

Aerts S, Lambrechts D, Maity S, Van Loo P, Coessens B, De Smet F, Tranchevent LC, De Moor B, Marynen P, Hassan B, Carmeliet P, Moreau Y.

Nat Biotechnol. 2006 May;24(5):537-44. Erratum in: Nat Biotechnol. 2006 Jun;24(6):719.

PMID:
16680138
8.

SiPaGene: A new repository for instant online retrieval, sharing and meta-analyses of GeneChip expression data.

Menssen A, Edinger G, Grün JR, Haase U, Baumgrass R, Grützkau A, Radbruch A, Burmester GR, Häupl T.

BMC Genomics. 2009 Mar 5;10:98. doi: 10.1186/1471-2164-10-98.

9.

Mining gene expression data by interpreting principal components.

Roden JC, King BW, Trout D, Mortazavi A, Wold BJ, Hart CE.

BMC Bioinformatics. 2006 Apr 7;7:194.

10.

BAMarraytrade mark: Java software for Bayesian analysis of variance for microarray data.

Ishwaran H, Rao JS, Kogalur UB.

BMC Bioinformatics. 2006 Feb 8;7:59.

11.

Statistical comparison framework and visualization scheme for ranking-based algorithms in high-throughput genome-wide studies.

Tembe WD, Pearson JV, Homer N, Lowey J, Suh E, Craig DW.

J Comput Biol. 2009 Apr;16(4):565-77. doi: 10.1089/cmb.2008.0151.

12.

Gene selection with multiple ordering criteria.

Chen JJ, Tsai CA, Tzeng S, Chen CH.

BMC Bioinformatics. 2007 Mar 5;8:74.

13.

Integrative literature and data mining to rank disease candidate genes.

Wu C, Zhu C, Jegga AG.

Methods Mol Biol. 2014;1159:207-26. doi: 10.1007/978-1-4939-0709-0_12. Review.

PMID:
24788269
14.

In silico gene prioritization by integrating multiple data sources.

Chen Y, Wang W, Zhou Y, Shields R, Chanda SK, Elston RC, Li J.

PLoS One. 2011;6(6):e21137. doi: 10.1371/journal.pone.0021137. Epub 2011 Jun 24.

15.

Signature Evaluation Tool (SET): a Java-based tool to evaluate and visualize the sample discrimination abilities of gene expression signatures.

Jen CH, Yang TP, Tung CY, Su SH, Lin CH, Hsu MT, Wang HW.

BMC Bioinformatics. 2008 Jan 28;9:58. doi: 10.1186/1471-2105-9-58.

16.
17.

iCTNet: a Cytoscape plugin to produce and analyze integrative complex traits networks.

Wang L, Khankhanian P, Baranzini SE, Mousavi P.

BMC Bioinformatics. 2011 Sep 26;12:380. doi: 10.1186/1471-2105-12-380.

18.

HiTSEE KNIME: a visualization tool for hit selection and analysis in high-throughput screening experiments for the KNIME platform.

Strobelt H, Bertini E, Braun J, Deussen O, Groth U, Mayer TU, Merhof D.

BMC Bioinformatics. 2012;13 Suppl 8:S4. doi: 10.1186/1471-2105-13-S8-S4. Epub 2012 May 18.

19.

Predicting cancer involvement of genes from heterogeneous data.

Aragues R, Sander C, Oliva B.

BMC Bioinformatics. 2008 Mar 27;9:172. doi: 10.1186/1471-2105-9-172.

20.
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