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Results: 1 to 20 of 125

Similar articles for PubMed (Select 23311503)

1.

A 34K SNP genotyping array for Populus trichocarpa: design, application to the study of natural populations and transferability to other Populus species.

Geraldes A, Difazio SP, Slavov GT, Ranjan P, Muchero W, Hannemann J, Gunter LE, Wymore AM, Grassa CJ, Farzaneh N, Porth I, McKown AD, Skyba O, Li E, Fujita M, Klápště J, Martin J, Schackwitz W, Pennacchio C, Rokhsar D, Friedmann MC, Wasteneys GO, Guy RD, El-Kassaby YA, Mansfield SD, Cronk QC, Ehlting J, Douglas CJ, Tuskan GA.

Mol Ecol Resour. 2013 Mar;13(2):306-23. doi: 10.1111/1755-0998.12056. Epub 2013 Jan 11.

PMID:
23311503
2.

Quantitative high resolution melting: two methods to determine SNP allele frequencies from pooled samples.

Capper RL, Jin YK, Lundgren PB, Peplow LM, Matz MV, van Oppen MJ.

BMC Genet. 2015 Jun 13;16:62. doi: 10.1186/s12863-015-0222-z.

3.

Partitioning of multivariate phenotypes using regression trees reveals complex patterns of adaptation to climate across the range of black cottonwood (Populus trichocarpa).

Oubida RW, Gantulga D, Zhang M, Zhou L, Bawa R, Holliday JA.

Front Plant Sci. 2015 Mar 27;6:181. doi: 10.3389/fpls.2015.00181. eCollection 2015.

4.

Single-nucleotide polymorphism discovery and validation in high-density SNP array for genetic analysis in European white oaks.

Lepoittevin C, Bodénès C, Chancerel E, Villate L, Lang T, Lesur I, Boury C, Ehrenmann F, Zelenica D, Boland A, Besse C, Garnier-Géré P, Plomion C, Kremer A.

Mol Ecol Resour. 2015 Mar 25. doi: 10.1111/1755-0998.12407. [Epub ahead of print]

PMID:
25818027
5.

Recent Y chromosome divergence despite ancient origin of dioecy in poplars (Populus).

Geraldes A, Hefer CA, Capron A, Kolosova N, Martinez-Nuñez F, Soolanayakanahally RY, Stanton B, Guy RD, Mansfield SD, Douglas CJ, Cronk QC.

Mol Ecol. 2015 Jul;24(13):3243-56. doi: 10.1111/mec.13126. Epub 2015 Apr 2.

PMID:
25728270
6.

Development, validation and genetic analysis of a large soybean SNP genotyping array.

Lee YG, Jeong N, Kim JH, Lee K, Kim KH, Pirani A, Ha BK, Kang ST, Park BS, Moon JK, Kim N, Jeong SC.

Plant J. 2015 Feb;81(4):625-36. doi: 10.1111/tpj.12755.

PMID:
25641104
7.

Association genetics, geography and ecophysiology link stomatal patterning in Populus trichocarpa with carbon gain and disease resistance trade-offs.

McKown AD, Guy RD, Quamme L, Klápště J, La Mantia J, Constabel CP, El-Kassaby YA, Hamelin RC, Zifkin M, Azam MS.

Mol Ecol. 2014 Dec;23(23):5771-90. doi: 10.1111/mec.12969. Epub 2014 Nov 8.

PMID:
25319679
8.

The development and characterization of a 57K single nucleotide polymorphism array for rainbow trout.

Palti Y, Gao G, Liu S, Kent MP, Lien S, Miller MR, Rexroad CE 3rd, Moen T.

Mol Ecol Resour. 2015 May;15(3):662-72. doi: 10.1111/1755-0998.12337. Epub 2014 Oct 24.

PMID:
25294387
9.

A powerful tool for genome analysis in maize: development and evaluation of the high density 600 k SNP genotyping array.

Unterseer S, Bauer E, Haberer G, Seidel M, Knaak C, Ouzunova M, Meitinger T, Strom TM, Fries R, Pausch H, Bertani C, Davassi A, Mayer KF, Schön CC.

BMC Genomics. 2014 Sep 29;15:823. doi: 10.1186/1471-2164-15-823.

10.

Quantitative analysis of low-density SNP data for parentage assignment and estimation of family contributions to pooled samples.

Henshall JM, Dierens L, Sellars MJ.

Genet Sel Evol. 2014 Sep 2;46:51. doi: 10.1186/s12711-014-0051-y.

11.

Population genomics of Populus trichocarpa identifies signatures of selection and adaptive trait associations.

Evans LM, Slavov GT, Rodgers-Melnick E, Martin J, Ranjan P, Muchero W, Brunner AM, Schackwitz W, Gunter L, Chen JG, Tuskan GA, DiFazio SP.

Nat Genet. 2014 Oct;46(10):1089-96. doi: 10.1038/ng.3075. Epub 2014 Aug 24.

PMID:
25151358
12.

Landscape genomics of Populus trichocarpa: the role of hybridization, limited gene flow, and natural selection in shaping patterns of population structure.

Geraldes A, Farzaneh N, Grassa CJ, McKown AD, Guy RD, Mansfield SD, Douglas CJ, Cronk QC.

Evolution. 2014 Nov;68(11):3260-80. doi: 10.1111/evo.12497. Epub 2014 Sep 4.

PMID:
25065449
13.

A novel set of single-copy nuclear DNA markers for the genetic study of Salicaceae.

Du SH, Wang ZS, Zhang JG.

Genet Mol Res. 2014 Jul 4;13(3):4911-7. doi: 10.4238/2014.July.4.5.

14.

A single-nucleotide polymorphism-based approach for rapid and cost-effective genetic wolf monitoring in Europe based on noninvasively collected samples.

Kraus RH, vonHoldt B, Cocchiararo B, Harms V, Bayerl H, Kühn R, Förster DW, Fickel J, Roos C, Nowak C.

Mol Ecol Resour. 2015 Mar;15(2):295-305. doi: 10.1111/1755-0998.12307. Epub 2014 Aug 8.

PMID:
25042673
15.

An updated felCat5 SNP manifest for the Illumina Feline 63k SNP genotyping array.

Willet CE, Haase B.

Anim Genet. 2014 Aug;45(4):614-5. doi: 10.1111/age.12169. Epub 2014 May 7. No abstract available.

PMID:
24804964
16.

Genome-wide association implicates numerous genes underlying ecological trait variation in natural populations of Populus trichocarpa.

McKown AD, Klápště J, Guy RD, Geraldes A, Porth I, Hannemann J, Friedmann M, Muchero W, Tuskan GA, Ehlting J, Cronk QC, El-Kassaby YA, Mansfield SD, Douglas CJ.

New Phytol. 2014 Jul;203(2):535-53. doi: 10.1111/nph.12815. Epub 2014 Apr 22.

PMID:
24750093
17.

Genotyping-by-sequencing for Populus population genomics: an assessment of genome sampling patterns and filtering approaches.

Schilling MP, Wolf PG, Duffy AM, Rai HS, Rowe CA, Richardson BA, Mock KE.

PLoS One. 2014 Apr 18;9(4):e95292. doi: 10.1371/journal.pone.0095292. eCollection 2014.

18.

Development of the catfish 250K SNP array for genome-wide association studies.

Liu S, Sun L, Li Y, Sun F, Jiang Y, Zhang Y, Zhang J, Feng J, Kaltenboeck L, Kucuktas H, Liu Z.

BMC Res Notes. 2014 Mar 10;7:135. doi: 10.1186/1756-0500-7-135.

19.

Geographical and environmental gradients shape phenotypic trait variation and genetic structure in Populus trichocarpa.

McKown AD, Guy RD, Klápště J, Geraldes A, Friedmann M, Cronk QC, El-Kassaby YA, Mansfield SD, Douglas CJ.

New Phytol. 2014 Mar;201(4):1263-76. doi: 10.1111/nph.12601. Epub 2013 Nov 25.

PMID:
24491114
20.

Development of SNP-genotyping arrays in two shellfish species.

Lapègue S, Harrang E, Heurtebise S, Flahauw E, Donnadieu C, Gayral P, Ballenghien M, Genestout L, Barbotte L, Mahla R, Haffray P, Klopp C.

Mol Ecol Resour. 2014 Jul;14(4):820-30. doi: 10.1111/1755-0998.12230. Epub 2014 Mar 5.

PMID:
24447767
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