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Results: 1 to 20 of 106

1.

Implicit estimation of ecological model parameters.

Weir B, Miller RN, Spitz YH.

Bull Math Biol. 2013 Feb;75(2):223-57. doi: 10.1007/s11538-012-9801-6. Epub 2013 Jan 5.

PMID:
23292361
[PubMed - indexed for MEDLINE]
2.

Parametric and nonparametric population methods: their comparative performance in analysing a clinical dataset and two Monte Carlo simulation studies.

Bustad A, Terziivanov D, Leary R, Port R, Schumitzky A, Jelliffe R.

Clin Pharmacokinet. 2006;45(4):365-83.

PMID:
16584284
[PubMed - indexed for MEDLINE]
3.

Bayesian learning and predictability in a stochastic nonlinear dynamical model.

Parslow J, Cressie N, Campbell EP, Jones E, Murray L.

Ecol Appl. 2013 Jun;23(4):679-98.

PMID:
23865222
[PubMed - indexed for MEDLINE]
4.

Accelerated maximum likelihood parameter estimation for stochastic biochemical systems.

Daigle BJ Jr, Roh MK, Petzold LR, Niemi J.

BMC Bioinformatics. 2012 May 1;13:68. doi: 10.1186/1471-2105-13-68.

PMID:
22548918
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Parameter inference for discretely observed stochastic kinetic models using stochastic gradient descent.

Wang Y, Christley S, Mjolsness E, Xie X.

BMC Syst Biol. 2010 Jul 21;4:99. doi: 10.1186/1752-0509-4-99.

PMID:
20663171
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Comparison of Nonmem 7.2 estimation methods and parallel processing efficiency on a target-mediated drug disposition model.

Gibiansky L, Gibiansky E, Bauer R.

J Pharmacokinet Pharmacodyn. 2012 Feb;39(1):17-35. doi: 10.1007/s10928-011-9228-y. Epub 2011 Nov 19.

PMID:
22101761
[PubMed - indexed for MEDLINE]
7.

EEG dipole localization bounds and MAP algorithms for head models with parameter uncertainties.

Radich BM, Buckley KM.

IEEE Trans Biomed Eng. 1995 Mar;42(3):233-41.

PMID:
7698778
[PubMed - indexed for MEDLINE]
8.
9.

Efficient computation of parameter sensitivities of discrete stochastic chemical reaction networks.

Rathinam M, Sheppard PW, Khammash M.

J Chem Phys. 2010 Jan 21;132(3):034103. doi: 10.1063/1.3280166.

PMID:
20095724
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Data cloning: easy maximum likelihood estimation for complex ecological models using Bayesian Markov chain Monte Carlo methods.

Lele SR, Dennis B, Lutscher F.

Ecol Lett. 2007 Jul;10(7):551-63. Erratum in: Ecol Lett. 2007 Sep;10(9):866.

PMID:
17542934
[PubMed - indexed for MEDLINE]
11.

Brownian models and coalescent structures.

Blum MG, Damerval C, Manel S, François O.

Theor Popul Biol. 2004 May;65(3):249-61.

PMID:
15066421
[PubMed - indexed for MEDLINE]
12.

COAST: Controllable approximative stochastic reaction algorithm.

Wagner H, Möller M, Prank K.

J Chem Phys. 2006 Nov 7;125(17):174104.

PMID:
17100426
[PubMed - indexed for MEDLINE]
13.

Global parameter identification of stochastic reaction networks from single trajectories.

Müller CL, Ramaswamy R, Sbalzarini IF.

Adv Exp Med Biol. 2012;736:477-98. doi: 10.1007/978-1-4419-7210-1_28.

PMID:
22161347
[PubMed - indexed for MEDLINE]
14.

Markov chain Monte Carlo approach to parameter estimation in the FitzHugh-Nagumo model.

Jensen AC, Ditlevsen S, Kessler M, Papaspiliopoulos O.

Phys Rev E Stat Nonlin Soft Matter Phys. 2012 Oct;86(4 Pt 1):041114. Epub 2012 Oct 10.

PMID:
23214536
[PubMed - indexed for MEDLINE]
15.

Biochemical fluctuations, optimisation and the linear noise approximation.

Pahle J, Challenger JD, Mendes P, McKane AJ.

BMC Syst Biol. 2012 Jul 17;6:86. doi: 10.1186/1752-0509-6-86.

PMID:
22805626
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Nonlinear functional response parameter estimation in a stochastic predator-prey model.

Gilioli G, Pasquali S, Ruggeri F.

Math Biosci Eng. 2012 Jan 1;9(1):75-96. doi: 10.3934/mbe.2012.9.75.

PMID:
22229397
[PubMed - indexed for MEDLINE]
17.

Application of adjoint Monte Carlo to accelerate simulations of mono-directional beams in treatment planning for boron neutron capture therapy.

Nievaart VA, Légràdy D, Moss RL, Kloosterman JL, van der Hagen TH, van Dam H.

Med Phys. 2007 Apr;34(4):1321-35.

PMID:
17500463
[PubMed - indexed for MEDLINE]
18.

Linear theory for filtering nonlinear multiscale systems with model error.

Berry T, Harlim J.

Proc Math Phys Eng Sci. 2014 Jul 8;470(2167):20140168.

PMID:
25002829
[PubMed]
19.

Mean-field stochastic theory for species-rich assembled communities.

McKane A, Alonso D, Solé RV.

Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics. 2000 Dec;62(6 Pt B):8466-84.

PMID:
11138149
[PubMed - indexed for MEDLINE]
20.

Parameter estimation of in silico biological pathways with particle filtering towards a petascale computing.

Nakamura K, Yoshida R, Nagasaki M, Miyano S, Higuchi T.

Pac Symp Biocomput. 2009:227-38.

PMID:
19209704
[PubMed - indexed for MEDLINE]
Free Article
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