Similar articles for PMID: 23282199

Year	Number of Results
2006	2
2008	2
2009	2
2010	2
2011	17
2012	30
2013	27
2014	21
2015	11
2016	12
2017	12
2018	11
2019	11
2020	9
2021	12
2022	22
2023	3
2024	0

1

Optimizing hybrid assembly of next-generation sequence data from Enterococcus faecium: a microbe with highly divergent genome.

Wang Y, Yu Y, Pan B, Hao P, Li Y, Shao Z, Xu X, Li X. Wang Y, et al. BMC Syst Biol. 2012;6 Suppl 3(Suppl 3):S21. doi: 10.1186/1752-0509-6-S3-S21. Epub 2012 Dec 17. BMC Syst Biol. 2012. PMID: 23282199 Free PMC article.

2

Plasmids Shaped the Recent Emergence of the Major Nosocomial Pathogen Enterococcus faecium.

Arredondo-Alonso S, Top J, McNally A, Puranen S, Pesonen M, Pensar J, Marttinen P, Braat JC, Rogers MRC, van Schaik W, Kaski S, Willems RJL, Corander J, Schürch AC. Arredondo-Alonso S, et al. mBio. 2020 Feb 11;11(1):e03284-19. doi: 10.1128/mBio.03284-19. mBio. 2020. PMID: 32047136 Free PMC article.

3

Completion of draft bacterial genomes by long-read sequencing of synthetic genomic pools.

Derakhshani H, Bernier SP, Marko VA, Surette MG. Derakhshani H, et al. BMC Genomics. 2020 Jul 29;21(1):519. doi: 10.1186/s12864-020-06910-6. BMC Genomics. 2020. PMID: 32727443 Free PMC article.

4

Genome sequence of Enterococcus faecium clinical isolate LCT-EF128.

Chen Z, Chang D, Zou Y, Su L, Zhu Y, Fang X, Wang J, Guo Y, Zhao J, Li D, Fang C, Yang R, Liu C. Chen Z, et al. J Bacteriol. 2012 Sep;194(17):4765. doi: 10.1128/JB.00996-12. J Bacteriol. 2012. PMID: 22887667 Free PMC article.

5

Comparison of long-read sequencing technologies in the hybrid assembly of complex bacterial genomes.

De Maio N, Shaw LP, Hubbard A, George S, Sanderson ND, Swann J, Wick R, AbuOun M, Stubberfield E, Hoosdally SJ, Crook DW, Peto TEA, Sheppard AE, Bailey MJ, Read DS, Anjum MF, Walker AS, Stoesser N, On Behalf Of The Rehab Consortium. De Maio N, et al. Microb Genom. 2019 Sep;5(9):e000294. doi: 10.1099/mgen.0.000294. Epub 2019 Aug 30. Microb Genom. 2019. PMID: 31483244 Free PMC article.

6

High-quality genome sequence assembly of R.A73 Enterococcus faecium isolated from freshwater fish mucus.

El Jeni R, Ghedira K, El Bour M, Abdelhak S, Benkahla A, Bouhaouala-Zahar B. El Jeni R, et al. BMC Microbiol. 2020 Oct 23;20(1):322. doi: 10.1186/s12866-020-01980-8. BMC Microbiol. 2020. PMID: 33096980 Free PMC article.

7

Evaluation of strategies for the assembly of diverse bacterial genomes using MinION long-read sequencing.

Goldstein S, Beka L, Graf J, Klassen JL. Goldstein S, et al. BMC Genomics. 2019 Jan 9;20(1):23. doi: 10.1186/s12864-018-5381-7. BMC Genomics. 2019. PMID: 30626323 Free PMC article.

8

Enterococcus faecium genome dynamics during long-term asymptomatic patient gut colonization.

Bayjanov JR, Baan J, Rogers MRC, Troelstra A, Willems RJL, van Schaik W. Bayjanov JR, et al. Microb Genom. 2019 Jul;5(7):e000277. doi: 10.1099/mgen.0.000277. Epub 2019 Jun 5. Microb Genom. 2019. PMID: 31166888 Free PMC article.

9

Hybrid De Novo Genome Assembly for the Generation of Complete Genomes of Urinary Bacteria using Short- and Long-read Sequencing Technologies.

Sharon BM, Hulyalkar NV, Nguyen VH, Zimmern PE, Palmer KL, De Nisco NJ. Sharon BM, et al. J Vis Exp. 2021 Aug 20;(174). doi: 10.3791/62872. J Vis Exp. 2021. PMID: 34487123

10

High quality 3C de novo assembly and annotation of a multidrug resistant ST-111 Pseudomonas aeruginosa genome: Benchmark of hybrid and non-hybrid assemblers.

Molina-Mora JA, Campos-Sánchez R, Rodríguez C, Shi L, García F. Molina-Mora JA, et al. Sci Rep. 2020 Jan 29;10(1):1392. doi: 10.1038/s41598-020-58319-6. Sci Rep. 2020. PMID: 31996747 Free PMC article.

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