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Results: 1 to 20 of 103

1.

Quantification of stochastic noise of splicing and polyadenylation in Entamoeba histolytica.

Hon CC, Weber C, Sismeiro O, Proux C, Koutero M, Deloger M, Das S, Agrahari M, Dillies MA, Jagla B, Coppee JY, Bhattacharya A, Guillen N.

Nucleic Acids Res. 2013 Feb 1;41(3):1936-52. doi: 10.1093/nar/gks1271. Epub 2012 Dec 20.

PMID:
23258700
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

An intron enhancer recognized by splicing factors activates polyadenylation.

Lou H, Gagel RF, Berget SM.

Genes Dev. 1996 Jan 15;10(2):208-19.

PMID:
8566754
[PubMed - indexed for MEDLINE]
Free Article
3.

Stochastic noise in splicing machinery.

Melamud E, Moult J.

Nucleic Acids Res. 2009 Aug;37(14):4873-86. doi: 10.1093/nar/gkp471. Epub 2009 Jun 22.

PMID:
19546110
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Regulatory mechanisms for 3'-end alternative splicing and polyadenylation of the Glial Fibrillary Acidic Protein, GFAP, transcript.

Blechingberg J, Lykke-Andersen S, Jensen TH, Jørgensen AL, Nielsen AL.

Nucleic Acids Res. 2007;35(22):7636-50. Epub 2007 Nov 2.

PMID:
17981838
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Genome-wide landscape of polyadenylation in Arabidopsis provides evidence for extensive alternative polyadenylation.

Wu X, Liu M, Downie B, Liang C, Ji G, Li QQ, Hunt AG.

Proc Natl Acad Sci U S A. 2011 Jul 26;108(30):12533-8. doi: 10.1073/pnas.1019732108. Epub 2011 Jul 11.

PMID:
21746925
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Noisy splicing drives mRNA isoform diversity in human cells.

Pickrell JK, Pai AA, Gilad Y, Pritchard JK.

PLoS Genet. 2010 Dec 9;6(12):e1001236. doi: 10.1371/journal.pgen.1001236.

PMID:
21151575
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Widespread mRNA polyadenylation events in introns indicate dynamic interplay between polyadenylation and splicing.

Tian B, Pan Z, Lee JY.

Genome Res. 2007 Feb;17(2):156-65. Epub 2007 Jan 8.

PMID:
17210931
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

In silico analysis of EST and genomic sequences allowed the prediction of cis-regulatory elements for Entamoeba histolytica mRNA polyadenylation.

Zamorano A, López-Camarillo C, Orozco E, Weber C, Guillen N, Marchat LA.

Comput Biol Chem. 2008 Aug;32(4):256-63. doi: 10.1016/j.compbiolchem.2008.03.019. Epub 2008 Apr 12.

PMID:
18514032
[PubMed - indexed for MEDLINE]
9.

Functional characterization of spliceosomal introns and identification of U2, U4, and U5 snRNAs in the deep-branching eukaryote Entamoeba histolytica.

Davis CA, Brown MP, Singh U.

Eukaryot Cell. 2007 Jun;6(6):940-8. Epub 2007 Apr 27.

PMID:
17468393
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

In vitro polyadenylation is stimulated by the presence of an upstream intron.

Niwa M, Rose SD, Berget SM.

Genes Dev. 1990 Sep;4(9):1552-9.

PMID:
1701407
[PubMed - indexed for MEDLINE]
Free Article
11.

Multiple transcripts of the murine immunoglobulin epsilon membrane locus are generated by alternative splicing and differential usage of two polyadenylation sites.

Anand S, Batista FD, Tkach T, Efremov DG, Burrone OR.

Mol Immunol. 1997 Feb;34(2):175-83.

PMID:
9188850
[PubMed - indexed for MEDLINE]
12.

Alternative isoform regulation in human tissue transcriptomes.

Wang ET, Sandberg R, Luo S, Khrebtukova I, Zhang L, Mayr C, Kingsmore SF, Schroth GP, Burge CB.

Nature. 2008 Nov 27;456(7221):470-6. doi: 10.1038/nature07509.

PMID:
18978772
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

B-cell and plasma-cell splicing differences: a potential role in regulated immunoglobulin RNA processing.

Bruce SR, Dingle RW, Peterson ML.

RNA. 2003 Oct;9(10):1264-73.

PMID:
13130140
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Transcriptional activity regulates alternative cleavage and polyadenylation.

Ji Z, Luo W, Li W, Hoque M, Pan Z, Zhao Y, Tian B.

Mol Syst Biol. 2011 Sep 27;7:534. doi: 10.1038/msb.2011.69.

PMID:
21952137
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Entamoeba histolytica: comparative genomics of the pre-mRNA 3' end processing machinery.

López-Camarillo C, Orozco E, Marchat LA.

Exp Parasitol. 2005 Jul;110(3):184-90.

PMID:
15955310
[PubMed - indexed for MEDLINE]
16.

Multiple transcription initiation sites, alternative splicing, and differential polyadenylation contribute to the complexity of human neurofibromatosis 2 transcripts.

Chang LS, Akhmametyeva EM, Wu Y, Zhu L, Welling DB.

Genomics. 2002 Jan;79(1):63-76.

PMID:
11827459
[PubMed - indexed for MEDLINE]
17.

Convergence of RNA cis elements and cellular polyadenylation factors in the regulation of human cytomegalovirus UL37 exon 1 unspliced RNA production.

Su Y, Adair R, Davis CN, DiFronzo NL, Colberg-Poley AM.

J Virol. 2003 Dec;77(23):12729-41.

PMID:
14610195
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Splicing kinetics and transcript release from the chromatin compartment limit the rate of Lipid A-induced gene expression.

Pandya-Jones A, Bhatt DM, Lin CH, Tong AJ, Smale ST, Black DL.

RNA. 2013 Jun;19(6):811-27. doi: 10.1261/rna.039081.113. Epub 2013 Apr 24.

PMID:
23616639
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

The exon 4 poly(A) site of the human calcitonin/CGRP-I pre-mRNA is a weak site in vitro.

van Oers CC, Bakker L, Baas PD.

Biochim Biophys Acta. 1994 May 17;1218(1):55-63.

PMID:
8193165
[PubMed - indexed for MEDLINE]
20.
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