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Results: 1 to 20 of 92

1.

Rule extraction in gene-disease relationship discovery.

Hou WJ, Chen HY.

Gene. 2013 Apr 10;518(1):132-8. doi: 10.1016/j.gene.2012.11.060. Epub 2012 Dec 9.

PMID:
23235120
[PubMed - indexed for MEDLINE]
2.

Semi-automated curation of protein subcellular localization: a text mining-based approach to Gene Ontology (GO) Cellular Component curation.

Van Auken K, Jaffery J, Chan J, Müller HM, Sternberg PW.

BMC Bioinformatics. 2009 Jul 21;10:228. doi: 10.1186/1471-2105-10-228.

PMID:
19622167
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Text mining in livestock animal science: introducing the potential of text mining to animal sciences.

Sahadevan S, Hofmann-Apitius M, Schellander K, Tesfaye D, Fluck J, Friedrich CM.

J Anim Sci. 2012 Oct;90(10):3666-76. doi: 10.2527/jas.2011-4841. Epub 2012 Jun 4.

PMID:
22665627
[PubMed - indexed for MEDLINE]
Free Article
4.

Application of automatic mutation-gene pair extraction to diseases.

Erdogmus M, Sezerman OU.

J Bioinform Comput Biol. 2007 Dec;5(6):1261-75.

PMID:
18172928
[PubMed - indexed for MEDLINE]
5.

BIOADI: a machine learning approach to identifying abbreviations and definitions in biological literature.

Kuo CJ, Ling MH, Lin KT, Hsu CN.

BMC Bioinformatics. 2009 Dec 3;10 Suppl 15:S7. doi: 10.1186/1471-2105-10-S15-S7.

PMID:
19958517
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

A knowledge-driven conditional approach to extract pharmacogenomics specific drug-gene relationships from free text.

Xu R, Wang Q.

J Biomed Inform. 2012 Oct;45(5):827-34. doi: 10.1016/j.jbi.2012.04.011. Epub 2012 Apr 27.

PMID:
22561026
[PubMed - indexed for MEDLINE]
Free Article
7.

An automated procedure to identify biomedical articles that contain cancer-associated gene variants.

McDonald R, Scott Winters R, Ankuda CK, Murphy JA, Rogers AE, Pereira F, Greenblatt MS, White PS.

Hum Mutat. 2006 Sep;27(9):957-64.

PMID:
16865690
[PubMed - indexed for MEDLINE]
8.

Integrative mining of traditional Chinese medicine literature and MEDLINE for functional gene networks.

Zhou X, Liu B, Wu Z, Feng Y.

Artif Intell Med. 2007 Oct;41(2):87-104. Epub 2007 Sep 5.

PMID:
17804209
[PubMed - indexed for MEDLINE]
9.

Resolving anaphoras for the extraction of drug-drug interactions in pharmacological documents.

Segura-Bedmar I, Crespo M, de Pablo-Sánchez C, Martínez P.

BMC Bioinformatics. 2010 Apr 16;11 Suppl 2:S1. doi: 10.1186/1471-2105-11-S2-S1.

PMID:
20406499
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Cross-Ontology multi-level association rule mining in the Gene Ontology.

Manda P, Ozkan S, Wang H, McCarthy F, Bridges SM.

PLoS One. 2012;7(10):e47411. doi: 10.1371/journal.pone.0047411. Epub 2012 Oct 12.

PMID:
23071802
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Automated recognition of malignancy mentions in biomedical literature.

Jin Y, McDonald RT, Lerman K, Mandel MA, Carroll S, Liberman MY, Pereira FC, Winters RS, White PS.

BMC Bioinformatics. 2006 Nov 7;7:492.

PMID:
17090325
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

MKEM: a Multi-level Knowledge Emergence Model for mining undiscovered public knowledge.

Ijaz AZ, Song M, Lee D.

BMC Bioinformatics. 2010 Apr 16;11 Suppl 2:S3. doi: 10.1186/1471-2105-11-S2-S3.

PMID:
20406501
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Comparative experiments on learning information extractors for proteins and their interactions.

Bunescu R, Ge R, Kate RJ, Marcotte EM, Mooney RJ, Ramani AK, Wong YW.

Artif Intell Med. 2005 Feb;33(2):139-55.

PMID:
15811782
[PubMed - indexed for MEDLINE]
14.

GeneTopics--interpretation of gene sets via literature-driven topic models.

Wang V, Xi L, Enayetallah A, Fauman E, Ziemek D.

BMC Syst Biol. 2013;7 Suppl 5:S10. doi: 10.1186/1752-0509-7-S5-S10. Epub 2013 Dec 9.

PMID:
24564875
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Identifying relevant data for a biological database: handcrafted rules versus machine learning.

Sehgal AK, Das S, Noto K, Saier MH Jr, Elkan C.

IEEE/ACM Trans Comput Biol Bioinform. 2011 May-Jun;8(3):851-7. doi: 10.1109/TCBB.2009.83.

PMID:
21393656
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Text mining for traditional Chinese medical knowledge discovery: a survey.

Zhou X, Peng Y, Liu B.

J Biomed Inform. 2010 Aug;43(4):650-60. doi: 10.1016/j.jbi.2010.01.002. Epub 2010 Jan 13.

PMID:
20074663
[PubMed - indexed for MEDLINE]
Free Article
17.

Comparison of character-level and part of speech features for name recognition in biomedical texts.

Collier N, Takeuchi K.

J Biomed Inform. 2004 Dec;37(6):423-35.

PMID:
15542016
[PubMed - indexed for MEDLINE]
Free Article
18.

PPIExtractor: a protein interaction extraction and visualization system for biomedical literature.

Yang Z, Zhao Z, Li Y, Hu Y, Lin H.

IEEE Trans Nanobioscience. 2013 Sep;12(3):173-81. doi: 10.1109/TNB.2013.2263837. Epub 2013 Aug 21.

PMID:
23974658
[PubMed - indexed for MEDLINE]
19.

Toward better understanding of protein secondary structure: extracting prediction rules.

Nguyen MN, Zurada JM, Rajapakse JC.

IEEE/ACM Trans Comput Biol Bioinform. 2011 May-Jun;8(3):858-64. doi: 10.1109/TCBB.2010.16.

PMID:
21393657
[PubMed - indexed for MEDLINE]
20.

Strong-association-rule mining for large-scale gene-expression data analysis: a case study on human SAGE data.

Becquet C, Blachon S, Jeudy B, Boulicaut JF, Gandrillon O.

Genome Biol. 2002;3(12):RESEARCH0067. Epub 2002 Nov 21.

PMID:
12537556
[PubMed - indexed for MEDLINE]
Free PMC Article

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