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Items: 1 to 20 of 91

1.

A Bayesian approach to phylogeographic clustering.

Manolopoulou I, Legarreta L, Emerson BC, Brooks S, Tavaré S.

Interface Focus. 2011 Dec 6;1(6):909-21. doi: 10.1098/rsfs.2011.0054. Epub 2011 Oct 5.

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3.

Improved reversible jump algorithms for Bayesian species delimitation.

Rannala B, Yang Z.

Genetics. 2013 May;194(1):245-53. doi: 10.1534/genetics.112.149039. Epub 2013 Mar 15.

4.

Bayesian coestimation of phylogeny and sequence alignment.

Lunter G, Miklós I, Drummond A, Jensen JL, Hein J.

BMC Bioinformatics. 2005 Apr 1;6:83.

5.

Evaluation of a bayesian coalescent method of species delimitation.

Zhang C, Zhang DX, Zhu T, Yang Z.

Syst Biol. 2011 Dec;60(6):747-61. doi: 10.1093/sysbio/syr071. Epub 2011 Aug 29.

PMID:
21876212
6.

A model for space-time cluster detection using spatial clusters with flexible temporal risk patterns.

Gangnon RE.

Stat Med. 2010 Sep 30;29(22):2325-37. doi: 10.1002/sim.3984.

PMID:
20564730
7.

Bayesian phylogenetic model selection using reversible jump Markov chain Monte Carlo.

Huelsenbeck JP, Larget B, Alfaro ME.

Mol Biol Evol. 2004 Jun;21(6):1123-33. Epub 2004 Mar 19.

8.

PCA and clustering reveal alternate mtDNA phylogeny of N and M clades.

Alexe G, Satya RV, Seiler M, Platt D, Bhanot T, Hui S, Tanaka M, Levine AJ, Bhanot G.

J Mol Evol. 2008 Nov;67(5):465-87. doi: 10.1007/s00239-008-9148-7. Epub 2008 Oct 15.

PMID:
18855041
9.

Detection of dispersed short tandem repeats using reversible jump Markov chain Monte Carlo.

Liang T, Fan X, Li Q, Li SY.

Nucleic Acids Res. 2012 Oct;40(19):e147. doi: 10.1093/nar/gks644. Epub 2012 Jun 29.

11.

A general and flexible approach to estimating the social relations model using Bayesian methods.

Lüdtke O, Robitzsch A, Kenny DA, Trautwein U.

Psychol Methods. 2013 Mar;18(1):101-19. doi: 10.1037/a0029252. Epub 2012 Jul 16.

PMID:
22799626
12.

Polytomies and Bayesian phylogenetic inference.

Lewis PO, Holder MT, Holsinger KE.

Syst Biol. 2005 Apr;54(2):241-53.

PMID:
16012095
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14.

Modelling categorical covariates in Bayesian disease mapping by partition structures.

Giudici P, Knorr-Held L, Rasser G.

Stat Med. 2000 Sep 15-30;19(17-18):2579-93.

PMID:
10960873
15.

Modelling heterotachy in phylogenetic inference by reversible-jump Markov chain Monte Carlo.

Pagel M, Meade A.

Philos Trans R Soc Lond B Biol Sci. 2008 Dec 27;363(1512):3955-64. doi: 10.1098/rstb.2008.0178.

16.

An example of complex modelling in dentistry using Markov chain Monte Carlo (MCMC) simulation.

Helfenstein U, Menghini G, Steiner M, Murati F.

Community Dent Health. 2002 Sep;19(3):152-60.

PMID:
12269461
17.

A hierarchical model for spatially clustered disease rates.

Gangnon RE, Clayton MK.

Stat Med. 2003 Oct 30;22(20):3213-28.

PMID:
14518024
18.

Bayesian phylogenetics with BEAUti and the BEAST 1.7.

Drummond AJ, Suchard MA, Xie D, Rambaut A.

Mol Biol Evol. 2012 Aug;29(8):1969-73. doi: 10.1093/molbev/mss075. Epub 2012 Feb 25.

19.

The effects of rate variation on ancestral inference in the coalescent.

Markovtsova L, Marjoram P, Tavaré S.

Genetics. 2000 Nov;156(3):1427-36.

20.

Exact computation of coalescent likelihood for panmictic and subdivided populations under the infinite sites model.

Wu Y.

IEEE/ACM Trans Comput Biol Bioinform. 2010 Oct-Dec;7(4):611-8. doi: 10.1109/TCBB.2010.2.

PMID:
21030730
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