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Results: 1 to 20 of 107

1.

Circadian oscillations of protein-coding and regulatory RNAs in a highly dynamic mammalian liver epigenome.

Vollmers C, Schmitz RJ, Nathanson J, Yeo G, Ecker JR, Panda S.

Cell Metab. 2012 Dec 5;16(6):833-45. doi: 10.1016/j.cmet.2012.11.004.

PMID:
23217262
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Histone methyltransferase MLL3 contributes to genome-scale circadian transcription.

Valekunja UK, Edgar RS, Oklejewicz M, van der Horst GT, O'Neill JS, Tamanini F, Turner DJ, Reddy AB.

Proc Natl Acad Sci U S A. 2013 Jan 22;110(4):1554-9. doi: 10.1073/pnas.1214168110. Epub 2013 Jan 7.

PMID:
23297224
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Rhythmic histone acetylation underlies transcription in the mammalian circadian clock.

Etchegaray JP, Lee C, Wade PA, Reppert SM.

Nature. 2003 Jan 9;421(6919):177-82. Epub 2002 Dec 11.

PMID:
12483227
[PubMed - indexed for MEDLINE]
4.

Genome-wide RNA polymerase II profiles and RNA accumulation reveal kinetics of transcription and associated epigenetic changes during diurnal cycles.

Le Martelot G, Canella D, Symul L, Migliavacca E, Gilardi F, Liechti R, Martin O, Harshman K, Delorenzi M, Desvergne B, Herr W, Deplancke B, Schibler U, Rougemont J, Guex N, Hernandez N, Naef F; CycliX Consortium.

PLoS Biol. 2012;10(11):e1001442. doi: 10.1371/journal.pbio.1001442. Epub 2012 Nov 27.

PMID:
23209382
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Transcriptional architecture and chromatin landscape of the core circadian clock in mammals.

Koike N, Yoo SH, Huang HC, Kumar V, Lee C, Kim TK, Takahashi JS.

Science. 2012 Oct 19;338(6105):349-54. doi: 10.1126/science.1226339. Epub 2012 Aug 30.

PMID:
22936566
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Genome-wide and phase-specific DNA-binding rhythms of BMAL1 control circadian output functions in mouse liver.

Rey G, Cesbron F, Rougemont J, Reinke H, Brunner M, Naef F.

PLoS Biol. 2011 Feb;9(2):e1000595. doi: 10.1371/journal.pbio.1000595. Epub 2011 Feb 22.

PMID:
21364973
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Exploring the transcriptional landscape of plant circadian rhythms using genome tiling arrays.

Hazen SP, Naef F, Quisel T, Gendron JM, Chen H, Ecker JR, Borevitz JO, Kay SA.

Genome Biol. 2009 Feb 11;10(2):R17. doi: 10.1186/gb-2009-10-2-r17.

PMID:
19210792
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

The mammalian clock component PERIOD2 coordinates circadian output by interaction with nuclear receptors.

Schmutz I, Ripperger JA, Baeriswyl-Aebischer S, Albrecht U.

Genes Dev. 2010 Feb 15;24(4):345-57. doi: 10.1101/gad.564110.

PMID:
20159955
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Photoreceptor phagocytosis is mediated by phosphoinositide signaling.

Mustafi D, Kevany BM, Genoud C, Bai X, Palczewski K.

FASEB J. 2013 Nov;27(11):4585-95. doi: 10.1096/fj.13-237537. Epub 2013 Aug 2.

PMID:
23913857
[PubMed - indexed for MEDLINE]
10.

Brain-specific rescue of Clock reveals system-driven transcriptional rhythms in peripheral tissue.

Hughes ME, Hong HK, Chong JL, Indacochea AA, Lee SS, Han M, Takahashi JS, Hogenesch JB.

PLoS Genet. 2012;8(7):e1002835. doi: 10.1371/journal.pgen.1002835. Epub 2012 Jul 26.

PMID:
22844252
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Circadian epigenomic remodeling and hepatic lipogenesis: lessons from HDAC3.

Sun Z, Feng D, Everett LJ, Bugge A, Lazar MA.

Cold Spring Harb Symp Quant Biol. 2011;76:49-55. doi: 10.1101/sqb.2011.76.011494. Epub 2011 Sep 6. Review.

PMID:
21900149
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Time of feeding and the intrinsic circadian clock drive rhythms in hepatic gene expression.

Vollmers C, Gill S, DiTacchio L, Pulivarthy SR, Le HD, Panda S.

Proc Natl Acad Sci U S A. 2009 Dec 15;106(50):21453-8. doi: 10.1073/pnas.0909591106. Epub 2009 Nov 25.

PMID:
19940241
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Multiple mechanisms regulate circadian expression of the gene for cholesterol 7alpha-hydroxylase (Cyp7a), a key enzyme in hepatic bile acid biosynthesis.

Noshiro M, Usui E, Kawamoto T, Kubo H, Fujimoto K, Furukawa M, Honma S, Makishima M, Honma K, Kato Y.

J Biol Rhythms. 2007 Aug;22(4):299-311.

PMID:
17660447
[PubMed - indexed for MEDLINE]
14.

A molecular mechanism for circadian clock negative feedback.

Duong HA, Robles MS, Knutti D, Weitz CJ.

Science. 2011 Jun 17;332(6036):1436-9. doi: 10.1126/science.1196766.

PMID:
21680841
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Attenuated food anticipatory activity and abnormal circadian locomotor rhythms in Rgs16 knockdown mice.

Hayasaka N, Aoki K, Kinoshita S, Yamaguchi S, Wakefield JK, Tsuji-Kawahara S, Horikawa K, Ikegami H, Wakana S, Murakami T, Ramabhadran R, Miyazawa M, Shibata S.

PLoS One. 2011 Mar 9;6(3):e17655. doi: 10.1371/journal.pone.0017655.

PMID:
21408016
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Rhythmic PER abundance defines a critical nodal point for negative feedback within the circadian clock mechanism.

Chen R, Schirmer A, Lee Y, Lee H, Kumar V, Yoo SH, Takahashi JS, Lee C.

Mol Cell. 2009 Nov 13;36(3):417-30. doi: 10.1016/j.molcel.2009.10.012.

PMID:
19917250
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Spatiotemporal clustering of the epigenome reveals rules of dynamic gene regulation.

Yu P, Xiao S, Xin X, Song CX, Huang W, McDee D, Tanaka T, Wang T, He C, Zhong S.

Genome Res. 2013 Feb;23(2):352-64. doi: 10.1101/gr.144949.112. Epub 2012 Oct 2. Erratum in: Genome Res. 2013 Apr;23(4):747.

PMID:
23033340
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Kruppel-like factor KLF10 is a link between the circadian clock and metabolism in liver.

Guillaumond F, Gréchez-Cassiau A, Subramaniam M, Brangolo S, Peteri-Brünback B, Staels B, Fiévet C, Spelsberg TC, Delaunay F, Teboul M.

Mol Cell Biol. 2010 Jun;30(12):3059-70. doi: 10.1128/MCB.01141-09. Epub 2010 Apr 12.

PMID:
20385766
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Diurnal rhythms in neurexins transcripts and inhibitory/excitatory synapse scaffold proteins in the biological clock.

Shapiro-Reznik M, Jilg A, Lerner H, Earnest DJ, Zisapel N.

PLoS One. 2012;7(5):e37894. doi: 10.1371/journal.pone.0037894. Epub 2012 May 25.

PMID:
22662246
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

The interplay of cis-regulatory elements rules circadian rhythms in mouse liver.

Korenčič A, Bordyugov G, Košir R, Rozman D, Goličnik M, Herzel H.

PLoS One. 2012;7(11):e46835. doi: 10.1371/journal.pone.0046835. Epub 2012 Nov 5.

PMID:
23144788
[PubMed - indexed for MEDLINE]
Free PMC Article

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