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Development and application of microsatellites in candidate genes related to wood properties in the Chinese white poplar (Populus tomentosa Carr.).

Du Q, Gong C, Pan W, Zhang D.

DNA Res. 2013 Feb;20(1):31-44. doi: 10.1093/dnares/dss031. Epub 2012 Dec 4.


Genic microsatellite markers in Brassica rapa: development, characterization, mapping, and their utility in other cultivated and wild Brassica relatives.

Ramchiary N, Nguyen VD, Li X, Hong CP, Dhandapani V, Choi SR, Yu G, Piao ZY, Lim YP.

DNA Res. 2011 Oct;18(5):305-20. doi: 10.1093/dnares/dsr017. Epub 2011 Jul 17.


Polymorphic simple sequence repeat (SSR) loci within cellulose synthase (PtoCesA) genes are associated with growth and wood properties in Populus tomentosa.

Du Q, Pan W, Xu B, Li B, Zhang D.

New Phytol. 2013 Feb;197(3):763-76. doi: 10.1111/nph.12072. Epub 2012 Dec 21.


Development of 15 novel microsatellite markers from cellulose synthase genes in Populus tomentosa (Salicaceae).

Du QZ, Zhang DQ, Li BL.

Am J Bot. 2012 Feb;99(2):e46-8. doi: 10.3732/ajb.1100308. Epub 2012 Jan 20.


Development, characterization, and comparative analysis of polymorphism at common bean SSR loci isolated from genic and genomic sources.

Hanai LR, de Campos T, Camargo LE, Benchimol LL, de Souza AP, Melotto M, Carbonell SA, Chioratto AF, Consoli L, Formighieri EF, Siqueira MV, Tsai SM, Vieira ML.

Genome. 2007 Mar;50(3):266-77.


Genetic diversity of peanut (Arachis hypogaea L.) and its wild relatives based on the analysis of hypervariable regions of the genome.

Moretzsohn Mde C, Hopkins MS, Mitchell SE, Kresovich S, Valls JF, Ferreira ME.

BMC Plant Biol. 2004 Jul 14;4:11.


Development and validation of genic-SSR markers in sesame by RNA-seq.

Zhang H, Wei L, Miao H, Zhang T, Wang C.

BMC Genomics. 2012 Jul 16;13:316. doi: 10.1186/1471-2164-13-316.


Microsatellite isolation and marker development in carrot - genomic distribution, linkage mapping, genetic diversity analysis and marker transferability across Apiaceae.

Cavagnaro PF, Chung SM, Manin S, Yildiz M, Ali A, Alessandro MS, Iorizzo M, Senalik DA, Simon PW.

BMC Genomics. 2011 Aug 1;12:386. doi: 10.1186/1471-2164-12-386.


A microarray-based genotyping and genetic mapping approach for highly heterozygous outcrossing species enables localization of a large fraction of the unassembled Populus trichocarpa genome sequence.

Drost DR, Novaes E, Boaventura-Novaes C, Benedict CI, Brown RS, Yin T, Tuskan GA, Kirst M.

Plant J. 2009 Jun;58(6):1054-67. doi: 10.1111/j.1365-313X.2009.03828.x. Epub 2009 Feb 10. Erratum in: Plant J. 2009 Dec;60(5):929.


Exploiting the transcriptome of Euphrates Poplar, Populus euphratica (Salicaceae) to develop and characterize new EST-SSR markers and construct an EST-SSR database.

Du FK, Xu F, Qu H, Feng S, Tang J, Wu R.

PLoS One. 2013 Apr 11;8(4):e61337. doi: 10.1371/journal.pone.0061337. Print 2013.


Development of genic-SSR markers by deep transcriptome sequencing in pigeonpea [Cajanus cajan (L.) Millspaugh].

Dutta S, Kumawat G, Singh BP, Gupta DK, Singh S, Dogra V, Gaikwad K, Sharma TR, Raje RS, Bandhopadhya TK, Datta S, Singh MN, Bashasab F, Kulwal P, Wanjari KB, K Varshney R, Cook DR, Singh NK.

BMC Plant Biol. 2011 Jan 20;11:17. doi: 10.1186/1471-2229-11-17.


Utility of EST-derived SSR in cultivated peanut (Arachis hypogaea L.) and Arachis wild species.

Liang X, Chen X, Hong Y, Liu H, Zhou G, Li S, Guo B.

BMC Plant Biol. 2009 Mar 24;9:35. doi: 10.1186/1471-2229-9-35.


Transferability of the EST-SSRs developed on Nules clementine (Citrus clementina Hort ex Tan) to other Citrus species and their effectiveness for genetic mapping.

Luro FL, Costantino G, Terol J, Argout X, Allario T, Wincker P, Talon M, Ollitrault P, Morillon R.

BMC Genomics. 2008 Jun 16;9:287. doi: 10.1186/1471-2164-9-287.


High-density linkage mapping and evolution of paralogs and orthologs in Salix and Populus.

Berlin S, Lagercrantz U, von Arnold S, Ost T, Rönnberg-Wästljung AC.

BMC Genomics. 2010 Feb 23;11:129. doi: 10.1186/1471-2164-11-129.


Development, characterization, and cross-species/genera transferability of SSR markers for rubber tree (Hevea brasiliensis).

Yu F, Wang BH, Feng SP, Wang JY, Li WG, Wu YT.

Plant Cell Rep. 2011 Mar;30(3):335-44. doi: 10.1007/s00299-010-0908-7. Epub 2010 Oct 20.


Allelic variation in a cellulose synthase gene (PtoCesA4) associated with growth and wood properties in Populus tomentosa.

Du Q, Xu B, Pan W, Gong C, Wang Q, Tian J, Li B, Zhang D.

G3 (Bethesda). 2013 Nov 6;3(11):2069-84. doi: 10.1534/g3.113.007724.

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