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Items: 1 to 20 of 92

1.

Progress in ion torrent semiconductor chip based sequencing.

Merriman B; Ion Torrent R&D Team, Rothberg JM.

Electrophoresis. 2012 Dec;33(23):3397-417. doi: 10.1002/elps.201200424. Review. Erratum in: Electrophoresis. 2013 Feb;34(4):619.

PMID:
23208921
2.

An integrated semiconductor device enabling non-optical genome sequencing.

Rothberg JM, Hinz W, Rearick TM, Schultz J, Mileski W, Davey M, Leamon JH, Johnson K, Milgrew MJ, Edwards M, Hoon J, Simons JF, Marran D, Myers JW, Davidson JF, Branting A, Nobile JR, Puc BP, Light D, Clark TA, Huber M, Branciforte JT, Stoner IB, Cawley SE, Lyons M, Fu Y, Homer N, Sedova M, Miao X, Reed B, Sabina J, Feierstein E, Schorn M, Alanjary M, Dimalanta E, Dressman D, Kasinskas R, Sokolsky T, Fidanza JA, Namsaraev E, McKernan KJ, Williams A, Roth GT, Bustillo J.

Nature. 2011 Jul 20;475(7356):348-52. doi: 10.1038/nature10242.

PMID:
21776081
3.

Feasibility study of semiconductor sequencing for noninvasive prenatal detection of fetal aneuploidy.

Yuan Y, Jiang F, Hua S, Du B, Hao Y, Ye L, Liu J, Feng K, Huang X, Yi X, Wang W, Yang L, Mu F, Liu C, Liang Y.

Clin Chem. 2013 May;59(5):846-9. doi: 10.1373/clinchem.2012.196725. Epub 2013 Jan 30.

4.

Tips and tricks for the assembly of a Corynebacterium pseudotuberculosis genome using a semiconductor sequencer.

Ramos RT, Carneiro AR, Soares Sde C, dos Santos AR, Almeida S, Guimarães L, Figueira F, Barbosa E, Tauch A, Azevedo V, Silva A.

Microb Biotechnol. 2013 Mar;6(2):150-6. doi: 10.1111/1751-7915.12006. Epub 2012 Dec 2.

5.

Semiconductor-based DNA sequencing of histone modification states.

Cheng CS, Rai K, Garber M, Hollinger A, Robbins D, Anderson S, Macbeth A, Tzou A, Carneiro MO, Raychowdhury R, Russ C, Hacohen N, Gershenwald JE, Lennon N, Nusbaum C, Chin L, Regev A, Amit I.

Nat Commun. 2013;4:2672. doi: 10.1038/ncomms3672.

6.

A new era of semiconductor genetics using ion-sensitive field-effect transistors: the gene-sensitive integrated cell.

Toumazou C, Thay TS, Georgiou P.

Philos Trans A Math Phys Eng Sci. 2014 Feb 24;372(2012):20130112. doi: 10.1098/rsta.2013.0112. Print 2014 Mar 28.

7.

Ultrafast DNA sequencing on a microchip by a hybrid separation mechanism that gives 600 bases in 6.5 minutes.

Fredlake CP, Hert DG, Kan CW, Chiesl TN, Root BE, Forster RE, Barron AE.

Proc Natl Acad Sci U S A. 2008 Jan 15;105(2):476-81. doi: 10.1073/pnas.0705093105. Epub 2008 Jan 9.

8.

The development and impact of 454 sequencing.

Rothberg JM, Leamon JH.

Nat Biotechnol. 2008 Oct;26(10):1117-24. doi: 10.1038/nbt1485.

PMID:
18846085
9.

RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer.

Shibata K, Itoh M, Aizawa K, Nagaoka S, Sasaki N, Carninci P, Konno H, Akiyama J, Nishi K, Kitsunai T, Tashiro H, Itoh M, Sumi N, Ishii Y, Nakamura S, Hazama M, Nishine T, Harada A, Yamamoto R, Matsumoto H, Sakaguchi S, Ikegami T, Kashiwagi K, Fujiwake S, Inoue K, Togawa Y.

Genome Res. 2000 Nov;10(11):1757-71.

10.

Efficient yeast ChIP-Seq using multiplex short-read DNA sequencing.

Lefrançois P, Euskirchen GM, Auerbach RK, Rozowsky J, Gibson T, Yellman CM, Gerstein M, Snyder M.

BMC Genomics. 2009 Jan 21;10:37. doi: 10.1186/1471-2164-10-37.

11.

Translating sanger-based routine DNA diagnostics into generic massive parallel ion semiconductor sequencing.

Diekstra A, Bosgoed E, Rikken A, van Lier B, Kamsteeg EJ, Tychon M, Derks RC, van Soest RA, Mensenkamp AR, Scheffer H, Neveling K, Nelen MR.

Clin Chem. 2015 Jan;61(1):154-62. doi: 10.1373/clinchem.2014.225250. Epub 2014 Oct 1.

12.

Simultaneous DNA amplification and detection using a pH-sensing semiconductor system.

Toumazou C, Shepherd LM, Reed SC, Chen GI, Patel A, Garner DM, Wang CJ, Ou CP, Amin-Desai K, Athanasiou P, Bai H, Brizido IM, Caldwell B, Coomber-Alford D, Georgiou P, Jordan KS, Joyce JC, La Mura M, Morley D, Sathyavruthan S, Temelso S, Thomas RE, Zhang L.

Nat Methods. 2013 Jul;10(7):641-6. doi: 10.1038/nmeth.2520. Epub 2013 Jun 9.

PMID:
23749303
13.

Large-scale microfabricated channel plates for high-throughput, fully automated DNA sequencing.

Kumagai H, Utsunomiya S, Nakamura S, Yamamoto R, Harada A, Kaji T, Hazama M, Ohashi T, Inami A, Ikegami T, Miyamoto K, Endo N, Yoshimi K, Toyoda A, Hattori M, Sakaki Y.

Electrophoresis. 2008 Dec;29(23):4723-32. doi: 10.1002/elps.200800301.

PMID:
19016243
14.

Fabrication and characterization of nanopores with insulated transverse nanoelectrodes for DNA sensing in salt solution.

Healy K, Ray V, Willis LJ, Peterman N, Bartel J, Drndić M.

Electrophoresis. 2012 Dec;33(23):3488-96. doi: 10.1002/elps.201200350.

15.

Improved transposon-based library preparation for the Ion Torrent platform.

Gorbacheva T, Quispe-Tintaya W, Popov VN, Vijg J, Maslov AY.

Biotechniques. 2015 Apr 1;58(4):200-2. doi: 10.2144/000114277. eCollection 2015 Apr.

16.

Eight hundred-base sequencing in a microfabricated electrophoretic device.

Koutny L, Schmalzing D, Salas-Solano O, El-Difrawy S, Adourian A, Buonocore S, Abbey K, McEwan P, Matsudaira P, Ehrlich D.

Anal Chem. 2000 Jul 15;72(14):3388-91.

PMID:
10939418
17.

Enzyme-linked fluorescent detection for automated multiplex DNA sequencing.

Cherry JL, Young H, Di Sera LJ, Ferguson FM, Kimball AW, Dunn DM, Gesteland RF, Weiss RB.

Genomics. 1994 Mar 1;20(1):68-74.

PMID:
8020958
18.

Current state-of-art of sequencing technologies for plant genomics research.

Thudi M, Li Y, Jackson SA, May GD, Varshney RK.

Brief Funct Genomics. 2012 Jan;11(1):3-11. doi: 10.1093/bfgp/elr045. Review.

PMID:
22345601
19.

A 768-lane microfabricated system for high-throughput DNA sequencing.

Aborn JH, El-Difrawy SA, Novotny M, Gismondi EA, Lam R, Matsudaira P, McKenna BK, O'Neil T, Streechon P, Ehrlich DJ.

Lab Chip. 2005 Jun;5(6):669-74. Epub 2005 May 9.

PMID:
15915260
20.

Recent patents of nanopore DNA sequencing technology: progress and challenges.

Zhou J, Xu B.

Recent Pat DNA Gene Seq. 2010 Nov;4(3):192-201. Review.

PMID:
21073437
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