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Results: 1 to 20 of 92

1.

Identification of an EMS-induced causal mutation in a gene required for boron-mediated root development by low-coverage genome re-sequencing in Arabidopsis.

Tabata R, Kamiya T, Shigenobu S, Yamaguchi K, Yamada M, Hasebe M, Fujiwara T, Sawa S.

Plant Signal Behav. 2013 Jan;8(1):e22534. doi: 10.4161/psb.22534. Epub 2012 Oct 26.

PMID:
23104114
[PubMed - in process]
Free PMC Article
2.

Identification of EMS-induced causal mutations in Arabidopsis thaliana by next-generation sequencing.

Uchida N, Sakamoto T, Tasaka M, Kurata T.

Methods Mol Biol. 2014;1062:259-70. doi: 10.1007/978-1-62703-580-4_14.

PMID:
24057371
[PubMed - indexed for MEDLINE]
3.

A novel viable allele of Arabidopsis CULLIN1 identified in a screen for superroot2 suppressors by next generation sequencing-assisted mapping.

Pacurar DI, Pacurar ML, Pacurar AM, Gutierrez L, Bellini C.

PLoS One. 2014 Jun 23;9(6):e100846. doi: 10.1371/journal.pone.0100846. eCollection 2014.

PMID:
24955772
[PubMed - in process]
Free PMC Article
4.

Identification of EMS-induced causal mutations in a non-reference Arabidopsis thaliana accession by whole genome sequencing.

Uchida N, Sakamoto T, Kurata T, Tasaka M.

Plant Cell Physiol. 2011 Apr;52(4):716-22. doi: 10.1093/pcp/pcr029. Epub 2011 Mar 11.

PMID:
21398646
[PubMed - indexed for MEDLINE]
5.

Whole Genome Sequencing and a New Bioinformatics Platform Allow for Rapid Gene Identification in D. melanogaster EMS Screens.

Gonzalez MA, Van Booven D, Hulme W, Ulloa RH, Lebrigio RF, Osterloh J, Logan M, Freeman M, Zuchner S.

Biology (Basel). 2012 Dec 5;1(3):766-77. doi: 10.3390/biology1030766.

PMID:
24832518
[PubMed]
Free PMC Article
6.

Deep sequencing strategies for mapping and identifying mutations from genetic screens.

Zuryn S, Jarriault S.

Worm. 2013 Jul 1;2(3):e25081. doi: 10.4161/worm.25081. Epub 2013 May 21. Review.

PMID:
24778934
[PubMed]
Free PMC Article
7.

Perspectives for identification of mutations in the zebrafish: making use of next-generation sequencing technologies for forward genetic approaches.

Henke K, Bowen ME, Harris MP.

Methods. 2013 Aug 15;62(3):185-96. doi: 10.1016/j.ymeth.2013.05.015. Epub 2013 Jun 5. Review.

PMID:
23748111
[PubMed - indexed for MEDLINE]
8.

Synteny-based mapping-by-sequencing enabled by targeted enrichment.

Galvão VC, Nordström KJ, Lanz C, Sulz P, Mathieu J, Posé D, Schmid M, Weigel D, Schneeberger K.

Plant J. 2012 Aug;71(3):517-26. doi: 10.1111/j.1365-313X.2012.04993.x. Epub 2012 May 14.

PMID:
22409706
[PubMed - indexed for MEDLINE]
9.

Facile mutant identification via a single parental backcross method and application of whole genome sequencing based mapping pipelines.

Allen RS, Nakasugi K, Doran RL, Millar AA, Waterhouse PM.

Front Plant Sci. 2013 Sep 13;4:362. doi: 10.3389/fpls.2013.00362. eCollection 2013.

PMID:
24062760
[PubMed]
Free PMC Article
10.

Next-generation mapping of Arabidopsis genes.

Austin RS, Vidaurre D, Stamatiou G, Breit R, Provart NJ, Bonetta D, Zhang J, Fung P, Gong Y, Wang PW, McCourt P, Guttman DS.

Plant J. 2011 Aug;67(4):715-25. doi: 10.1111/j.1365-313X.2011.04619.x. Epub 2011 Jul 18.

PMID:
21518053
[PubMed - indexed for MEDLINE]
11.

Identification of factors required for meristem function in Arabidopsis using a novel next generation sequencing fast forward genetics approach.

Mokry M, Nijman IJ, van Dijken A, Benjamins R, Heidstra R, Scheres B, Cuppen E.

BMC Genomics. 2011 May 20;12:256. doi: 10.1186/1471-2164-12-256.

PMID:
21599977
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Application of next-generation sequencing for rapid marker development in molecular plant breeding: a case study on anthracnose disease resistance in Lupinus angustifolius L.

Yang H, Tao Y, Zheng Z, Li C, Sweetingham MW, Howieson JG.

BMC Genomics. 2012 Jul 17;13:318. doi: 10.1186/1471-2164-13-318.

PMID:
22805587
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Efficient mapping and cloning of mutations in zebrafish by low-coverage whole-genome sequencing.

Bowen ME, Henke K, Siegfried KR, Warman ML, Harris MP.

Genetics. 2012 Mar;190(3):1017-24. doi: 10.1534/genetics.111.136069. Epub 2011 Dec 14.

PMID:
22174069
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

LOCAS--a low coverage assembly tool for resequencing projects.

Klein JD, Ossowski S, Schneeberger K, Weigel D, Huson DH.

PLoS One. 2011;6(8):e23455. doi: 10.1371/journal.pone.0023455. Epub 2011 Aug 15.

PMID:
21858125
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

PoolHap: inferring haplotype frequencies from pooled samples by next generation sequencing.

Long Q, Jeffares DC, Zhang Q, Ye K, Nizhynska V, Ning Z, Tyler-Smith C, Nordborg M.

PLoS One. 2011 Jan 5;6(1):e15292. doi: 10.1371/journal.pone.0015292.

PMID:
21264334
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

SNVHMM: predicting single nucleotide variants from next generation sequencing.

Bian J, Liu C, Wang H, Xing J, Kachroo P, Zhou X.

BMC Bioinformatics. 2013 Jul 15;14:225. doi: 10.1186/1471-2105-14-225.

PMID:
23855743
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Rapid identification of heterozygous mutations in Drosophila melanogaster using genomic capture sequencing.

Wang H, Chattopadhyay A, Li Z, Daines B, Li Y, Gao C, Gibbs R, Zhang K, Chen R.

Genome Res. 2010 Jul;20(7):981-8. doi: 10.1101/gr.102921.109. Epub 2010 May 14.

PMID:
20472684
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Connectivity Mapping for Candidate Therapeutics Identification Using Next Generation Sequencing RNA-Seq Data.

McArt DG, Dunne PD, Blayney JK, Salto-Tellez M, Van Schaeybroeck S, Hamilton PW, Zhang SD.

PLoS One. 2013 Jun 26;8(6):e66902. Print 2013.

PMID:
23840550
[PubMed - as supplied by publisher]
Free PMC Article
19.

A high-density collection of EMS-induced mutations for TILLING in Landsberg erecta genetic background of Arabidopsis.

Martín B, Ramiro M, Martínez-Zapater JM, Alonso-Blanco C.

BMC Plant Biol. 2009 Dec 14;9:147. doi: 10.1186/1471-2229-9-147.

PMID:
20003424
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

MutMap+: genetic mapping and mutant identification without crossing in rice.

Fekih R, Takagi H, Tamiru M, Abe A, Natsume S, Yaegashi H, Sharma S, Sharma S, Kanzaki H, Matsumura H, Saitoh H, Mitsuoka C, Utsushi H, Uemura A, Kanzaki E, Kosugi S, Yoshida K, Cano L, Kamoun S, Terauchi R.

PLoS One. 2013 Jul 10;8(7):e68529. doi: 10.1371/journal.pone.0068529. Print 2013.

PMID:
23874658
[PubMed - indexed for MEDLINE]
Free PMC Article

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