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Items: 1 to 20 of 204

1.

Neogene-dominated diversification in neotropical montane lichens: dating divergence events in the lichen-forming fungal genus Oropogon (Parmeliaceae).

Leavitt SD, Esslinger TL, Lumbsch HT.

Am J Bot. 2012 Nov;99(11):1764-77. doi: 10.3732/ajb.1200146. Epub 2012 Oct 23.

2.

Diversification of the newly recognized lichen-forming fungal lineage Montanelia (Parmeliaceae, Ascomycota) and its relation to key geological and climatic events.

Divakar PK, Del-Prado R, Lumbsch HT, Wedin M, Esslinger TL, Leavitt SD, Crespo A.

Am J Bot. 2012 Dec;99(12):2014-26. doi: 10.3732/ajb.1200258. Epub 2012 Nov 30.

3.

Miocene and Pliocene dominated diversification of the lichen-forming fungal genus Melanohalea (Parmeliaceae, Ascomycota) and Pleistocene population expansions.

Leavitt SD, Esslinger TL, Divakar PK, Lumbsch HT.

BMC Evol Biol. 2012 Sep 11;12:176. doi: 10.1186/1471-2148-12-176.

4.

Multilocus phylogeny of the lichen-forming fungal genus Melanohalea (Parmeliaceae, Ascomycota): insights on diversity, distributions, and a comparison of species tree and concatenated topologies.

Leavitt SD, Esslinger TL, Spribille T, Divakar PK, Thorsten Lumbsch H.

Mol Phylogenet Evol. 2013 Jan;66(1):138-52. doi: 10.1016/j.ympev.2012.09.013. Epub 2012 Sep 24.

PMID:
23017822
5.

Origin and diversification of major clades in parmelioid lichens (Parmeliaceae, Ascomycota) during the Paleogene inferred by Bayesian analysis.

Amo de Paz G, Cubas P, Divakar PK, Lumbsch HT, Crespo A.

PLoS One. 2011;6(12):e28161. doi: 10.1371/journal.pone.0028161. Epub 2011 Dec 8.

6.
7.

Testing the use of ITS rDNA and protein-coding genes in the generic and species delimitation of the lichen genus Usnea (Parmeliaceae, Ascomycota).

Truong C, Divakar PK, Yahr R, Crespo A, Clerc P.

Mol Phylogenet Evol. 2013 Aug;68(2):357-72. doi: 10.1016/j.ympev.2013.04.005. Epub 2013 Apr 16.

PMID:
23603312
8.

Pleistocene speciation in North American lichenized fungi and the impact of alternative species circumscriptions and rates of molecular evolution on divergence estimates.

Leavitt SD, Lumbsch HT, Stenroos S, St Clair LL.

PLoS One. 2013 Dec 26;8(12):e85240. doi: 10.1371/journal.pone.0085240. eCollection 2013.

9.

Who's getting around? Assessing species diversity and phylogeography in the widely distributed lichen-forming fungal genus Montanelia (Parmeliaceae, Ascomycota).

Leavitt SD, Divakar PK, Ohmura Y, Wang LS, Esslinger TL, Lumbsch HT.

Mol Phylogenet Evol. 2015 Sep;90:85-96. doi: 10.1016/j.ympev.2015.04.029. Epub 2015 May 16.

PMID:
25987532
10.

Species delimitation in the lichenized fungal genus Vulpicida (Parmeliaceae, Ascomycota) using gene concatenation and coalescent-based species tree approaches.

Saag L, Mark K, Saag A, Randlane T.

Am J Bot. 2014 Dec;101(12):2169-82. doi: 10.3732/ajb.1400439. Epub 2014 Dec 3.

11.

Species delimitation in taxonomically difficult lichen-forming fungi: an example from morphologically and chemically diverse Xanthoparmelia (Parmeliaceae) in North America.

Leavitt SD, Johnson LA, Goward T, St Clair LL.

Mol Phylogenet Evol. 2011 Sep;60(3):317-32. doi: 10.1016/j.ympev.2011.05.012. Epub 2011 May 25.

PMID:
21627994
12.
13.

Phylogenetic studies in the Candelariaceae (lichenized Ascomycota) based on nuclear ITS DNA sequence data.

Westberg M, Arup U, Kärnefelt I.

Mycol Res. 2007 Nov;111(Pt 11):1277-84. Epub 2007 Aug 19.

PMID:
18006290
14.

Timing of clade divergence and discordant estimates of genetic and morphological diversity in the Slender Madtom, Noturus exilis (Ictaluridae).

Blanton RE, Page LM, Hilber SA.

Mol Phylogenet Evol. 2013 Mar;66(3):679-93. doi: 10.1016/j.ympev.2012.10.022. Epub 2012 Nov 10.

PMID:
23149097
15.

Dating the diversification of the major lineages of Ascomycota (Fungi).

Prieto M, Wedin M.

PLoS One. 2013 Jun 14;8(6):e65576. doi: 10.1371/journal.pone.0065576. Print 2013.

16.

Accelerated evolutionary rates in tropical and oceanic parmelioid lichens (Ascomycota).

Lumbsch HT, Hipp AL, Divakar PK, Blanco O, Crespo A.

BMC Evol Biol. 2008 Sep 22;8:257. doi: 10.1186/1471-2148-8-257.

17.

Comprehensive molecular phylogenetic analysis and evolution of the genus Phyllactinia (Ascomycota: Erysiphales) and its allied genera.

Takamatsu S, Inagaki M, Niinomi S, Khodaparast SA, Shin HD, Grigaliunaite B, Havrylenko M.

Mycol Res. 2008 Mar;112(Pt 3):299-315. doi: 10.1016/j.mycres.2007.11.014. Epub 2007 Dec 14.

PMID:
18308528
18.
19.

Phylogenetic reassessment of the Teloschistaceae (lichen-forming Ascomycota, Lecanoromycetes).

Gaya E, Navarro-Rosinés P, Llimona X, Hladun N, Lutzoni F.

Mycol Res. 2008 May;112(Pt 5):528-46. doi: 10.1016/j.mycres.2007.11.005. Epub 2007 Nov 22.

PMID:
18406120
20.

Calibrating divergence times on species trees versus gene trees: implications for speciation history of Aphelocoma jays.

McCormack JE, Heled J, Delaney KS, Peterson AT, Knowles LL.

Evolution. 2011 Jan;65(1):184-202. doi: 10.1111/j.1558-5646.2010.01097.x.

PMID:
20681982
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