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Co-occurring anammox, denitrification, and codenitrification in agricultural soils.

Long A, Heitman J, Tobias C, Philips R, Song B.

Appl Environ Microbiol. 2013 Jan;79(1):168-76. doi: 10.1128/AEM.02520-12. Epub 2012 Oct 19.


Contribution of Anammox to Nitrogen Removal in Two Temperate Forest Soils.

Xi D, Bai R, Zhang L, Fang Y.

Appl Environ Microbiol. 2016 Jul 15;82(15):4602-12. doi: 10.1128/AEM.00888-16. Print 2016 Aug 1.


Oxygen at nanomolar levels reversibly suppresses process rates and gene expression in anammox and denitrification in the oxygen minimum zone off northern Chile.

Dalsgaard T, Stewart FJ, Thamdrup B, De Brabandere L, Revsbech NP, Ulloa O, Canfield DE, DeLong EF.

MBio. 2014 Oct 28;5(6):e01966. doi: 10.1128/mBio.01966-14.


Potential contribution of anammox to nitrogen loss from paddy soils in Southern China.

Yang XR, Li H, Nie SA, Su JQ, Weng BS, Zhu GB, Yao HY, Gilbert JA, Zhu YG.

Appl Environ Microbiol. 2015 Feb;81(3):938-47. doi: 10.1128/AEM.02664-14. Epub 2014 Nov 21.


Stark contrast in denitrification and anammox across the deep Norwegian trench in the Skagerrak.

Trimmer M, Engström P, Thamdrup B.

Appl Environ Microbiol. 2013 Dec;79(23):7381-9. doi: 10.1128/AEM.01970-13. Epub 2013 Sep 20.


Biogeographical distribution of diverse anaerobic ammonium oxidizing (anammox) bacteria in Cape Fear River Estuary.

Dale OR, Tobias CR, Song B.

Environ Microbiol. 2009 May;11(5):1194-207. doi: 10.1111/j.1462-2920.2008.01850.x. Epub 2009 Jan 21.


Occurrence and importance of anaerobic ammonium-oxidising bacteria in vegetable soils.

Shen LD, Wu HS, Gao ZQ, Xu XH, Chen TX, Liu S, Cheng HX.

Appl Microbiol Biotechnol. 2015 Jul;99(13):5709-18. doi: 10.1007/s00253-015-6454-z. Epub 2015 Feb 18.


Denitrification as the dominant nitrogen loss process in the Arabian Sea.

Ward BB, Devol AH, Rich JJ, Chang BX, Bulow SE, Naik H, Pratihary A, Jayakumar A.

Nature. 2009 Sep 3;461(7260):78-81. doi: 10.1038/nature08276.


Broad distribution of diverse anaerobic ammonium-oxidizing bacteria in chinese agricultural soils.

Shen LD, Liu S, Lou LP, Liu WP, Xu XY, Zheng P, Hu BL.

Appl Environ Microbiol. 2013 Oct;79(19):6167-72. doi: 10.1128/AEM.00884-13. Epub 2013 Jun 7.


Detection and diversity of copper containing nitrite reductase genes (nirK) in prokaryotic and fungal communities of agricultural soils.

Long A, Song B, Fridey K, Silva A.

FEMS Microbiol Ecol. 2015 Feb;91(2):1-9. doi: 10.1093/femsec/fiu004. Epub 2014 Dec 5.


Detection of anammox activity and 16S rRNA genes in ravine paddy field soil.

Sato Y, Ohta H, Yamagishi T, Guo Y, Nishizawa T, Rahman MH, Kuroda H, Kato T, Saito M, Yoshinaga I, Inubushi K, Suwa Y.

Microbes Environ. 2012;27(3):316-9. Epub 2012 Feb 22.


Diversity and abundance of anammox bacterial community in the deep-ocean surface sediment from equatorial Pacific.

Hong YG, Yin B, Zheng TL.

Appl Microbiol Biotechnol. 2011 Feb;89(4):1233-41. doi: 10.1007/s00253-010-2925-4. Epub 2010 Oct 15.


Impacts of nitrogen application rates on the activity and diversity of denitrifying bacteria in the Broadbalk Wheat Experiment.

Clark IM, Buchkina N, Jhurreea D, Goulding KW, Hirsch PR.

Philos Trans R Soc Lond B Biol Sci. 2012 May 5;367(1593):1235-44. doi: 10.1098/rstb.2011.0314.


High rates of denitrification and nitrous oxide emission in arid biological soil crusts from the Sultanate of Oman.

Abed RM, Lam P, de Beer D, Stief P.

ISME J. 2013 Sep;7(9):1862-75. doi: 10.1038/ismej.2013.55. Epub 2013 Apr 11.


Ammonia oxidation, denitrification and dissimilatory nitrate reduction to ammonium in two US Great Basin hot springs with abundant ammonia-oxidizing archaea.

Dodsworth JA, Hungate BA, Hedlund BP.

Environ Microbiol. 2011 Aug;13(8):2371-86. doi: 10.1111/j.1462-2920.2011.02508.x. Epub 2011 Jun 1.


Response of denitrification genes nirS, nirK, and nosZ to irrigation water quality in a Chinese agricultural soil.

Zhou ZF, Zheng YM, Shen JP, Zhang LM, He JZ.

Environ Sci Pollut Res Int. 2011 Nov;18(9):1644-52. doi: 10.1007/s11356-011-0482-8. Epub 2011 May 28.


Influence of fertilisation regimes on a nosZ-containing denitrifying community in a rice paddy soil.

Chen Z, Hou H, Zheng Y, Qin H, Zhu Y, Wu J, Wei W.

J Sci Food Agric. 2012 Mar 30;92(5):1064-72. doi: 10.1002/jsfa.4533. Epub 2011 Jul 27.


Influence of maize mucilage on the diversity and activity of the denitrifying community.

Mounier E, Hallet S, Chèneby D, Benizri E, Gruet Y, Nguyen C, Piutti S, Robin C, Slezack-Deschaumes S, Martin-Laurent F, Germon JC, Philippot L.

Environ Microbiol. 2004 Mar;6(3):301-12.


Spatial distribution and abundances of ammonia-oxidizing archaea (AOA) and ammonia-oxidizing bacteria (AOB) in mangrove sediments.

Li M, Cao H, Hong Y, Gu JD.

Appl Microbiol Biotechnol. 2011 Feb;89(4):1243-54. doi: 10.1007/s00253-010-2929-0. Epub 2010 Oct 16.


Evidence for the cooccurrence of nitrite-dependent anaerobic ammonium and methane oxidation processes in a flooded paddy field.

Shen LD, Liu S, Huang Q, Lian X, He ZF, Geng S, Jin RC, He YF, Lou LP, Xu XY, Zheng P, Hu BL.

Appl Environ Microbiol. 2014 Dec;80(24):7611-9. doi: 10.1128/AEM.02379-14. Epub 2014 Sep 26.

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