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Results: 1 to 20 of 101

Similar articles for PubMed (Select 23010778)

1.

A role for CTCF and cohesin in subtelomere chromatin organization, TERRA transcription, and telomere end protection.

Deng Z, Wang Z, Stong N, Plasschaert R, Moczan A, Chen HS, Hu S, Wikramasinghe P, Davuluri RV, Bartolomei MS, Riethman H, Lieberman PM.

EMBO J. 2012 Nov 5;31(21):4165-78. doi: 10.1038/emboj.2012.266. Epub 2012 Sep 25.

2.

The contribution of cohesin-SA1 to gene expression and chromatin architecture in two murine tissues.

Cuadrado A, Remeseiro S, Graña O, Pisano DG, Losada A.

Nucleic Acids Res. 2015 Mar 31;43(6):3056-67. doi: 10.1093/nar/gkv144. Epub 2015 Mar 3.

3.

Architectural proteins CTCF and cohesin have distinct roles in modulating the higher order structure and expression of the CFTR locus.

Gosalia N, Neems D, Kerschner JL, Kosak ST, Harris A.

Nucleic Acids Res. 2014 Sep;42(15):9612-22. doi: 10.1093/nar/gku648. Epub 2014 Jul 31.

4.

Mediator, TATA-binding protein, and RNA polymerase II contribute to low histone occupancy at active gene promoters in yeast.

Ansari SA, Paul E, Sommer S, Lieleg C, He Q, Daly AZ, Rode KA, Barber WT, Ellis LC, LaPorta E, Orzechowski AM, Taylor E, Reeb T, Wong J, Korber P, Morse RH.

J Biol Chem. 2014 May 23;289(21):14981-95. doi: 10.1074/jbc.M113.529354. Epub 2014 Apr 11.

5.

Subtelomeric CTCF and cohesin binding site organization using improved subtelomere assemblies and a novel annotation pipeline.

Stong N, Deng Z, Gupta R, Hu S, Paul S, Weiner AK, Eichler EE, Graves T, Fronick CC, Courtney L, Wilson RK, Lieberman PM, Davuluri RV, Riethman H.

Genome Res. 2014 Jun;24(6):1039-50. doi: 10.1101/gr.166983.113. Epub 2014 Mar 27.

6.

Transcription of angiogenin and ribonuclease 4 is regulated by RNA polymerase III elements and a CCCTC binding factor (CTCF)-dependent intragenic chromatin loop.

Sheng J, Luo C, Jiang Y, Hinds PW, Xu Z, Hu GF.

J Biol Chem. 2014 May 2;289(18):12520-34. doi: 10.1074/jbc.M114.551762. Epub 2014 Mar 21.

7.

A cohesin-independent role for NIPBL at promoters provides insights in CdLS.

Zuin J, Franke V, van Ijcken WF, van der Sloot A, Krantz ID, van der Reijden MI, Nakato R, Lenhard B, Wendt KS.

PLoS Genet. 2014 Feb 13;10(2):e1004153. doi: 10.1371/journal.pgen.1004153. eCollection 2014 Feb.

8.

Epigenetic control of SPI1 gene by CTCF and ISWI ATPase SMARCA5.

Dluhosova M, Curik N, Vargova J, Jonasova A, Zikmund T, Stopka T.

PLoS One. 2014 Feb 3;9(2):e87448. doi: 10.1371/journal.pone.0087448. eCollection 2014. Erratum in: PLoS One. 2014;9(3):e92635.

9.

CTCF and Rad21 act as host cell restriction factors for Kaposi's sarcoma-associated herpesvirus (KSHV) lytic replication by modulating viral gene transcription.

Li DJ, Verma D, Mosbruger T, Swaminathan S.

PLoS Pathog. 2014 Jan;10(1):e1003880. doi: 10.1371/journal.ppat.1003880. Epub 2014 Jan 9.

10.

Cohesin and CTCF differentially affect chromatin architecture and gene expression in human cells.

Zuin J, Dixon JR, van der Reijden MI, Ye Z, Kolovos P, Brouwer RW, van de Corput MP, van de Werken HJ, Knoch TA, van IJcken WF, Grosveld FG, Ren B, Wendt KS.

Proc Natl Acad Sci U S A. 2014 Jan 21;111(3):996-1001. doi: 10.1073/pnas.1317788111. Epub 2013 Dec 13.

11.

Cohesin and CTCF differentially regulate spatiotemporal runx1 expression during zebrafish development.

Marsman J, O'Neill AC, Kao BR, Rhodes JM, Meier M, Antony J, Mönnich M, Horsfield JA.

Biochim Biophys Acta. 2014 Jan;1839(1):50-61. doi: 10.1016/j.bbagrm.2013.11.007. Epub 2013 Dec 7.

PMID:
24321385
12.

Epigenetic deregulation of the LMP1/LMP2 locus of Epstein-Barr virus by mutation of a single CTCF-cohesin binding site.

Chen HS, Martin KA, Lu F, Lupey LN, Mueller JM, Lieberman PM, Tempera I.

J Virol. 2014 Feb;88(3):1703-13. doi: 10.1128/JVI.02209-13. Epub 2013 Nov 20.

13.

Cohesin-mediated interactions organize chromosomal domain architecture.

Sofueva S, Yaffe E, Chan WC, Georgopoulou D, Vietri Rudan M, Mira-Bontenbal H, Pollard SM, Schroth GP, Tanay A, Hadjur S.

EMBO J. 2013 Dec 11;32(24):3119-29. doi: 10.1038/emboj.2013.237. Epub 2013 Nov 1.

14.

CTCF mediates the TERT enhancer-promoter interactions in lung cancer cells: identification of a novel enhancer region involved in the regulation of TERT gene.

Eldholm V, Haugen A, Zienolddiny S.

Int J Cancer. 2014 May 15;134(10):2305-13. doi: 10.1002/ijc.28570. Epub 2013 Nov 14.

PMID:
24174344
15.

Extensive variation in chromatin states across humans.

Kasowski M, Kyriazopoulou-Panagiotopoulou S, Grubert F, Zaugg JB, Kundaje A, Liu Y, Boyle AP, Zhang QC, Zakharia F, Spacek DV, Li J, Xie D, Olarerin-George A, Steinmetz LM, Hogenesch JB, Kellis M, Batzoglou S, Snyder M.

Science. 2013 Nov 8;342(6159):750-2. doi: 10.1126/science.1242510. Epub 2013 Oct 17.

16.

Cohesin-based chromatin interactions enable regulated gene expression within preexisting architectural compartments.

Seitan VC, Faure AJ, Zhan Y, McCord RP, Lajoie BR, Ing-Simmons E, Lenhard B, Giorgetti L, Heard E, Fisher AG, Flicek P, Dekker J, Merkenschlager M.

Genome Res. 2013 Dec;23(12):2066-77. doi: 10.1101/gr.161620.113. Epub 2013 Sep 3.

17.

CTCF depletion alters chromatin structure and transcription of myeloid-specific factors.

Ouboussad L, Kreuz S, Lefevre PF.

J Mol Cell Biol. 2013 Oct;5(5):308-22. doi: 10.1093/jmcb/mjt023. Epub 2013 Aug 9.

18.

Reduction of Nipbl impairs cohesin loading locally and affects transcription but not cohesion-dependent functions in a mouse model of Cornelia de Lange Syndrome.

Remeseiro S, Cuadrado A, Kawauchi S, Calof AL, Lander AD, Losada A.

Biochim Biophys Acta. 2013 Dec;1832(12):2097-102. doi: 10.1016/j.bbadis.2013.07.020. Epub 2013 Aug 3.

19.

Role of CTCF protein in regulating FMR1 locus transcription.

Lanni S, Goracci M, Borrelli L, Mancano G, Chiurazzi P, Moscato U, Ferrè F, Helmer-Citterich M, Tabolacci E, Neri G.

PLoS Genet. 2013;9(7):e1003601. doi: 10.1371/journal.pgen.1003601. Epub 2013 Jul 18.

20.

Genome-wide and parental allele-specific analysis of CTCF and cohesin DNA binding in mouse brain reveals a tissue-specific binding pattern and an association with imprinted differentially methylated regions.

Prickett AR, Barkas N, McCole RB, Hughes S, Amante SM, Schulz R, Oakey RJ.

Genome Res. 2013 Oct;23(10):1624-35. doi: 10.1101/gr.150136.112. Epub 2013 Jun 26.

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