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Results: 1 to 20 of 113

1.

A noncoding RNA produced by arthropod-borne flaviviruses inhibits the cellular exoribonuclease XRN1 and alters host mRNA stability.

Moon SL, Anderson JR, Kumagai Y, Wilusz CJ, Akira S, Khromykh AA, Wilusz J.

RNA. 2012 Nov;18(11):2029-40. doi: 10.1261/rna.034330.112. Epub 2012 Sep 24.

PMID:
23006624
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

An RNA pseudoknot is required for production of yellow fever virus subgenomic RNA by the host nuclease XRN1.

Silva PA, Pereira CF, Dalebout TJ, Spaan WJ, Bredenbeek PJ.

J Virol. 2010 Nov;84(21):11395-406. doi: 10.1128/JVI.01047-10. Epub 2010 Aug 25.

PMID:
20739539
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Noncoding subgenomic flavivirus RNA: multiple functions in West Nile virus pathogenesis and modulation of host responses.

Roby JA, Pijlman GP, Wilusz J, Khromykh AA.

Viruses. 2014 Jan 27;6(2):404-27. doi: 10.3390/v6020404. Review.

PMID:
24473339
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

RNA structures required for production of subgenomic flavivirus RNA.

Funk A, Truong K, Nagasaki T, Torres S, Floden N, Balmori Melian E, Edmonds J, Dong H, Shi PY, Khromykh AA.

J Virol. 2010 Nov;84(21):11407-17. doi: 10.1128/JVI.01159-10. Epub 2010 Aug 18.

PMID:
20719943
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Japanese encephalitis virus non-coding RNA inhibits activation of interferon by blocking nuclear translocation of interferon regulatory factor 3.

Chang RY, Hsu TW, Chen YL, Liu SF, Tsai YJ, Lin YT, Chen YS, Fan YH.

Vet Microbiol. 2013 Sep 27;166(1-2):11-21. doi: 10.1016/j.vetmic.2013.04.026. Epub 2013 May 9.

PMID:
23755934
[PubMed - indexed for MEDLINE]
6.

Alterations in the Aedes aegypti transcriptome during infection with West Nile, dengue and yellow fever viruses.

Colpitts TM, Cox J, Vanlandingham DL, Feitosa FM, Cheng G, Kurscheid S, Wang P, Krishnan MN, Higgs S, Fikrig E.

PLoS Pathog. 2011 Sep;7(9):e1002189. doi: 10.1371/journal.ppat.1002189. Epub 2011 Sep 1.

PMID:
21909258
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

The 5' → 3' exoribonuclease XRN1/Pacman and its functions in cellular processes and development.

Jones CI, Zabolotskaya MV, Newbury SF.

Wiley Interdiscip Rev RNA. 2012 Jul-Aug;3(4):455-68. doi: 10.1002/wrna.1109. Epub 2012 Mar 1. Review.

PMID:
22383165
[PubMed - indexed for MEDLINE]
8.

Functional non-coding RNAs derived from the flavivirus 3' untranslated region.

Clarke BD, Roby JA, Slonchak A, Khromykh AA.

Virus Res. 2015 Feb 7. pii: S0168-1702(15)00051-9. doi: 10.1016/j.virusres.2015.01.026. [Epub ahead of print]

PMID:
25660582
[PubMed - as supplied by publisher]
9.

The capsid-coding region hairpin element (cHP) is a critical determinant of dengue virus and West Nile virus RNA synthesis.

Clyde K, Barrera J, Harris E.

Virology. 2008 Sep 30;379(2):314-23. doi: 10.1016/j.virol.2008.06.034. Epub 2008 Aug 3.

PMID:
18676000
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

West Nile virus encodes a microRNA-like small RNA in the 3' untranslated region which up-regulates GATA4 mRNA and facilitates virus replication in mosquito cells.

Hussain M, Torres S, Schnettler E, Funk A, Grundhoff A, Pijlman GP, Khromykh AA, Asgari S.

Nucleic Acids Res. 2012 Mar;40(5):2210-23. doi: 10.1093/nar/gkr848. Epub 2011 Nov 12.

PMID:
22080551
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

RNA structures that resist degradation by Xrn1 produce a pathogenic Dengue virus RNA.

Chapman EG, Moon SL, Wilusz J, Kieft JS.

Elife. 2014 Apr 1;3:e01892. doi: 10.7554/eLife.01892.

PMID:
24692447
[PubMed - in process]
Free PMC Article
12.

The structural basis of pathogenic subgenomic flavivirus RNA (sfRNA) production.

Chapman EG, Costantino DA, Rabe JL, Moon SL, Wilusz J, Nix JC, Kieft JS.

Science. 2014 Apr 18;344(6181):307-10. doi: 10.1126/science.1250897.

PMID:
24744377
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Noncoding flavivirus RNA displays RNA interference suppressor activity in insect and Mammalian cells.

Schnettler E, Sterken MG, Leung JY, Metz SW, Geertsema C, Goldbach RW, Vlak JM, Kohl A, Khromykh AA, Pijlman GP.

J Virol. 2012 Dec;86(24):13486-500. doi: 10.1128/JVI.01104-12. Epub 2012 Oct 3.

PMID:
23035235
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Competing and noncompeting activities of miR-122 and the 5' exonuclease Xrn1 in regulation of hepatitis C virus replication.

Li Y, Masaki T, Yamane D, McGivern DR, Lemon SM.

Proc Natl Acad Sci U S A. 2013 Jan 29;110(5):1881-6. doi: 10.1073/pnas.1213515110. Epub 2012 Dec 17.

PMID:
23248316
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Coordinated destruction of cellular messages in translation complexes by the gammaherpesvirus host shutoff factor and the mammalian exonuclease Xrn1.

Covarrubias S, Gaglia MM, Kumar GR, Wong W, Jackson AO, Glaunsinger BA.

PLoS Pathog. 2011 Oct;7(10):e1002339. doi: 10.1371/journal.ppat.1002339. Epub 2011 Oct 27.

PMID:
22046136
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

The 3' untranslated region of sindbis virus represses deadenylation of viral transcripts in mosquito and Mammalian cells.

Garneau NL, Sokoloski KJ, Opyrchal M, Neff CP, Wilusz CJ, Wilusz J.

J Virol. 2008 Jan;82(2):880-92. Epub 2007 Oct 31.

PMID:
17977976
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

The 3' untranslated region of the rabies virus glycoprotein mRNA specifically interacts with cellular PCBP2 protein and promotes transcript stability.

Palusa S, Ndaluka C, Bowen RA, Wilusz CJ, Wilusz J.

PLoS One. 2012;7(3):e33561. doi: 10.1371/journal.pone.0033561. Epub 2012 Mar 16.

PMID:
22438951
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Tristetraprolin controls the stability of cIAP2 mRNA through binding to the 3'UTR of cIAP2 mRNA.

Kim CW, Kim HK, Vo MT, Lee HH, Kim HJ, Min YJ, Cho WJ, Park JW.

Biochem Biophys Res Commun. 2010 Sep 10;400(1):46-52. doi: 10.1016/j.bbrc.2010.07.136. Epub 2010 Aug 4.

PMID:
20691152
[PubMed - indexed for MEDLINE]
19.

West Nile virus noncoding subgenomic RNA contributes to viral evasion of the type I interferon-mediated antiviral response.

Schuessler A, Funk A, Lazear HM, Cooper DA, Torres S, Daffis S, Jha BK, Kumagai Y, Takeuchi O, Hertzog P, Silverman R, Akira S, Barton DJ, Diamond MS, Khromykh AA.

J Virol. 2012 May;86(10):5708-18. doi: 10.1128/JVI.00207-12. Epub 2012 Feb 29.

PMID:
22379089
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Control of translation by the 5'- and 3'-terminal regions of the dengue virus genome.

Chiu WW, Kinney RM, Dreher TW.

J Virol. 2005 Jul;79(13):8303-15.

PMID:
15956576
[PubMed - indexed for MEDLINE]
Free PMC Article
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