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Results: 1 to 20 of 206

1.

Domestication and geographic origin of Oryza sativa in China: insights from multilocus analysis of nucleotide variation of O. sativa and O. rufipogon.

Wei X, Qiao WH, Chen YT, Wang RS, Cao LR, Zhang WX, Yuan NN, Li ZC, Zeng HL, Yang QW.

Mol Ecol. 2012 Oct;21(20):5073-87. doi: 10.1111/j.1365-294X.2012.05748.x. Epub 2012 Sep 18.

PMID:
22989375
[PubMed - indexed for MEDLINE]
2.

Origin of Oryza sativa in China inferred by nucleotide polymorphisms of organelle DNA.

Wei X, Wang R, Cao L, Yuan N, Huang J, Qiao W, Zhang W, Zeng H, Yang Q.

PLoS One. 2012;7(11):e49546. doi: 10.1371/journal.pone.0049546. Epub 2012 Nov 15.

PMID:
23166706
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Multilocus analysis of nucleotide variation of Oryza sativa and its wild relatives: severe bottleneck during domestication of rice.

Zhu Q, Zheng X, Luo J, Gaut BS, Ge S.

Mol Biol Evol. 2007 Mar;24(3):875-88. Epub 2007 Jan 11.

PMID:
17218640
[PubMed - indexed for MEDLINE]
Free Article
4.

Chloroplast DNA polymorphism and evolutional relationships between Asian cultivated rice (Oryza sativa) and its wild relatives (O. rufipogon).

Li WJ, Zhang B, Huang GW, Kang GP, Liang MZ, Chen LB.

Genet Mol Res. 2012 Dec 17;11(4):4418-31. doi: 10.4238/2012.October.9.8.

PMID:
23096910
[PubMed - indexed for MEDLINE]
Free Article
5.

Subspecies-specific intron length polymorphism markers reveal clear genetic differentiation in common wild rice (Oryza rufipogon L.) in relation to the domestication of cultivated rice (O. sativa L.).

Zhao X, Yang L, Zheng Y, Xu Z, Wu W.

J Genet Genomics. 2009 Jul;36(7):435-42. doi: 10.1016/S1673-8527(08)60133-2.

PMID:
19631918
[PubMed - indexed for MEDLINE]
6.

Phylogeography of Asian wild rice, Oryza rufipogon, reveals multiple independent domestications of cultivated rice, Oryza sativa.

Londo JP, Chiang YC, Hung KH, Chiang TY, Schaal BA.

Proc Natl Acad Sci U S A. 2006 Jun 20;103(25):9578-83. Epub 2006 Jun 9.

PMID:
16766658
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Phylogeography of Asian wild rice, Oryza rufipogon: a genome-wide view.

Huang P, Molina J, Flowers JM, Rubinstein S, Jackson SA, Purugganan MD, Schaal BA.

Mol Ecol. 2012 Sep;21(18):4593-604. doi: 10.1111/j.1365-294X.2012.05625.x. Epub 2012 May 30.

PMID:
22646149
[PubMed - indexed for MEDLINE]
8.

A map of rice genome variation reveals the origin of cultivated rice.

Huang X, Kurata N, Wei X, Wang ZX, Wang A, Zhao Q, Zhao Y, Liu K, Lu H, Li W, Guo Y, Lu Y, Zhou C, Fan D, Weng Q, Zhu C, Huang T, Zhang L, Wang Y, Feng L, Furuumi H, Kubo T, Miyabayashi T, Yuan X, Xu Q, Dong G, Zhan Q, Li C, Fujiyama A, Toyoda A, Lu T, Feng Q, Qian Q, Li J, Han B.

Nature. 2012 Oct 25;490(7421):497-501. doi: 10.1038/nature11532. Epub 2012 Oct 3.

PMID:
23034647
[PubMed - indexed for MEDLINE]
9.

New insights into the history of rice domestication.

Kovach MJ, Sweeney MT, McCouch SR.

Trends Genet. 2007 Nov;23(11):578-87. Epub 2007 Oct 25. Review.

PMID:
17963977
[PubMed - indexed for MEDLINE]
10.

Nonindependent domestication of the two rice subspecies, Oryza sativa ssp. indica and ssp. japonica, demonstrated by multilocus microsatellites.

Gao LZ, Innan H.

Genetics. 2008 Jun;179(2):965-76. doi: 10.1534/genetics.106.068072. Epub 2008 May 27.

PMID:
18505887
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

RAPD, RFLP and SSLP analyses of phylogenetic relationships between cultivated and wild species of rice.

Bautista NS, Solis R, Kamijima O, Ishii T.

Genes Genet Syst. 2001 Apr;76(2):71-9.

PMID:
11434461
[PubMed - indexed for MEDLINE]
Free Article
12.

Two evolutionary histories in the genome of rice: the roles of domestication genes.

He Z, Zhai W, Wen H, Tang T, Wang Y, Lu X, Greenberg AJ, Hudson RR, Wu CI, Shi S.

PLoS Genet. 2011 Jun;7(6):e1002100. doi: 10.1371/journal.pgen.1002100. Epub 2011 Jun 9.

PMID:
21695282
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Molecular evidence for a single evolutionary origin of domesticated rice.

Molina J, Sikora M, Garud N, Flowers JM, Rubinstein S, Reynolds A, Huang P, Jackson S, Schaal BA, Bustamante CD, Boyko AR, Purugganan MD.

Proc Natl Acad Sci U S A. 2011 May 17;108(20):8351-6. doi: 10.1073/pnas.1104686108. Epub 2011 May 2.

PMID:
21536870
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Evolutionary analysis of the Sub1 gene cluster that confers submergence tolerance to domesticated rice.

Fukao T, Harris T, Bailey-Serres J.

Ann Bot. 2009 Jan;103(2):143-50. doi: 10.1093/aob/mcn172. Epub 2008 Sep 29.

PMID:
18824474
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Large-scale DNA polymorphism study of Oryza sativa and O. rufipogon reveals the origin and divergence of Asian rice.

Rakshit S, Rakshit A, Matsumura H, Takahashi Y, Hasegawa Y, Ito A, Ishii T, Miyashita NT, Terauchi R.

Theor Appl Genet. 2007 Feb;114(4):731-43. Epub 2007 Jan 12.

PMID:
17219210
[PubMed - indexed for MEDLINE]
17.

Independent domestication of Asian rice followed by gene flow from japonica to indica.

Yang CC, Kawahara Y, Mizuno H, Wu J, Matsumoto T, Itoh T.

Mol Biol Evol. 2012 May;29(5):1471-9. doi: 10.1093/molbev/msr315. Epub 2011 Dec 22.

PMID:
22319137
[PubMed - indexed for MEDLINE]
Free Article
18.

Genetic variation in the chloroplast genome suggests multiple domestication of cultivated Asian rice (Oryza sativa L.).

Kawakami S, Ebana K, Nishikawa T, Sato Y, Vaughan DA, Kadowaki K.

Genome. 2007 Feb;50(2):180-7.

PMID:
17546083
[PubMed - indexed for MEDLINE]
19.

Genome-wide multilocus analysis of intraspecific differentiation in Oryza rufipogon Griff. from China and the influence of introgression from O. sativa L.

Dong YB, Li F, Pei XW, Wang F, Yuan QH, Wu HJ, Jia SR, Peng YF.

Genet Mol Res. 2013 Dec 2;12(4):6103-19. doi: 10.4238/2013.December.2.8.

PMID:
24338404
[PubMed - indexed for MEDLINE]
Free Article
20.

Levels and patterns of nucleotide variation in domestication QTL regions on rice chromosome 3 suggest lineage-specific selection.

Xie X, Molina J, Hernandez R, Reynolds A, Boyko AR, Bustamante CD, Purugganan MD.

PLoS One. 2011;6(6):e20670. doi: 10.1371/journal.pone.0020670. Epub 2011 Jun 6.

PMID:
21674010
[PubMed - indexed for MEDLINE]
Free PMC Article

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