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Archaea in the foregut of macropod marsupials: PCR and amplicon sequence-based observations.

Klieve AV, Ouwerkerk D, Maguire AJ.

J Appl Microbiol. 2012 Nov;113(5):1065-75. doi: 10.1111/j.1365-2672.2012.05428.x. Epub 2012 Sep 7.


Community composition and density of methanogens in the foregut of the Tammar wallaby (Macropus eugenii).

Evans PN, Hinds LA, Sly LI, McSweeney CS, Morrison M, Wright AD.

Appl Environ Microbiol. 2009 Apr;75(8):2598-602. doi: 10.1128/AEM.02436-08. Epub 2009 Feb 13.


Identification of methyl coenzyme M reductase A (mcrA) genes associated with methane-oxidizing archaea.

Hallam SJ, Girguis PR, Preston CM, Richardson PM, DeLong EF.

Appl Environ Microbiol. 2003 Sep;69(9):5483-91.


Methanomassiliicoccus luminyensis gen. nov., sp. nov., a methanogenic archaeon isolated from human faeces.

Dridi B, Fardeau ML, Ollivier B, Raoult D, Drancourt M.

Int J Syst Evol Microbiol. 2012 Aug;62(Pt 8):1902-7. doi: 10.1099/ijs.0.033712-0.


Pyrosequencing of mcrA and archaeal 16S rRNA genes reveals diversity and substrate preferences of methanogen communities in anaerobic digesters.

Wilkins D, Lu XY, Shen Z, Chen J, Lee PK.

Appl Environ Microbiol. 2015 Jan;81(2):604-13. doi: 10.1128/AEM.02566-14. Epub 2014 Nov 7.


Rumen-like methanogens identified from the crop of the folivorous South American bird, the hoatzin (Opisthocomus hoazin).

Wright AD, Northwood KS, Obispo NE.

ISME J. 2009 Oct;3(10):1120-6. doi: 10.1038/ismej.2009.41. Epub 2009 Apr 23.


Characterization of C1-metabolizing prokaryotic communities in methane seep habitats at the Kuroshima Knoll, southern Ryukyu Arc, by analyzing pmoA, mmoX, mxaF, mcrA, and 16S rRNA genes.

Inagaki F, Tsunogai U, Suzuki M, Kosaka A, Machiyama H, Takai K, Nunoura T, Nealson KH, Horikoshi K.

Appl Environ Microbiol. 2004 Dec;70(12):7445-55.


A putative new order of methanogenic Archaea inhabiting the human gut, as revealed by molecular analyses of the mcrA gene.

Mihajlovski A, Alric M, Brugère JF.

Res Microbiol. 2008 Sep-Oct;159(7-8):516-21. doi: 10.1016/j.resmic.2008.06.007. Epub 2008 Jul 2.


Stratification of Archaeal communities in shallow sediments of the Pearl River Estuary, Southern China.

Jiang L, Zheng Y, Chen J, Xiao X, Wang F.

Antonie Van Leeuwenhoek. 2011 May;99(4):739-51. doi: 10.1007/s10482-011-9548-3. Epub 2011 Jan 13.


Molecular analysis of methanogenic archaea in the forestomach of the alpaca (Vicugna pacos).

St-Pierre B, Wright AD.

BMC Microbiol. 2012 Jan 5;12:1. doi: 10.1186/1471-2180-12-1.


Vertical distribution of methanogens in the anoxic sediment of Rotsee (Switzerland).

Zepp Falz K, Holliger C, Grosskopf R, Liesack W, Nozhevnikova AN, Müller B, Wehrli B, Hahn D.

Appl Environ Microbiol. 1999 Jun;65(6):2402-8.


Quantification of mcrA by fluorescent PCR in methanogenic and methanotrophic microbial communities.

Nunoura T, Oida H, Miyazaki J, Miyashita A, Imachi H, Takai K.

FEMS Microbiol Ecol. 2008 May;64(2):240-7. doi: 10.1111/j.1574-6941.2008.00451.x. Epub 2008 Mar 3.


Molecular diversity of the rumen microbiome of Norwegian reindeer on natural summer pasture.

Sundset MA, Edwards JE, Cheng YF, Senosiain RS, Fraile MN, Northwood KS, Praesteng KE, Glad T, Mathiesen SD, Wright AD.

Microb Ecol. 2009 Feb;57(2):335-48. doi: 10.1007/s00248-008-9414-7. Epub 2008 Jul 8.


Structures of free-living and protozoa-associated methanogen communities in the bovine rumen differ according to comparative analysis of 16S rRNA and mcrA genes.

Tymensen LD, Beauchemin KA, McAllister TA.

Microbiology. 2012 Jul;158(Pt 7):1808-17. doi: 10.1099/mic.0.057984-0. Epub 2012 Apr 26.


Molecular characterization of potential nitrogen fixation by anaerobic methane-oxidizing archaea in the methane seep sediments at the number 8 Kumano Knoll in the Kumano Basin, offshore of Japan.

Miyazaki J, Higa R, Toki T, Ashi J, Tsunogai U, Nunoura T, Imachi H, Takai K.

Appl Environ Microbiol. 2009 Nov;75(22):7153-62. doi: 10.1128/AEM.01184-09. Epub 2009 Sep 25.


Diversity and community composition of methanogenic archaea in the rumen of Scottish upland sheep assessed by different methods.

Snelling TJ, Genç B, McKain N, Watson M, Waters SM, Creevey CJ, Wallace RJ.

PLoS One. 2014 Sep 24;9(9):e106491. doi: 10.1371/journal.pone.0106491. eCollection 2014.


Postinoculation protozoan establishment and association patterns of methanogenic archaea in the ovine rumen.

Ohene-Adjei S, Teather RM, Ivan M, Forster RJ.

Appl Environ Microbiol. 2007 Jul;73(14):4609-18. Epub 2007 May 18.


Methanogen community structure in the rumens of farmed sheep, cattle and red deer fed different diets.

Jeyanathan J, Kirs M, Ronimus RS, Hoskin SO, Janssen PH.

FEMS Microbiol Ecol. 2011 May;76(2):311-26. doi: 10.1111/j.1574-6941.2011.01056.x. Epub 2011 Feb 14.

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