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Items: 1 to 20 of 105

1.

Analysis of plant-derived miRNAs in animal small RNA datasets.

Zhang Y, Wiggins BE, Lawrence C, Petrick J, Ivashuta S, Heck G.

BMC Genomics. 2012 Aug 8;13:381. doi: 10.1186/1471-2164-13-381.

2.

Asymmetric purine-pyrimidine distribution in cellular small RNA population of papaya.

Aryal R, Yang X, Yu Q, Sunkar R, Li L, Ming R.

BMC Genomics. 2012 Dec 5;13:682. doi: 10.1186/1471-2164-13-682.

3.

Small RNA profiling reveals regulation of Arabidopsis miR168 and heterochromatic siRNA415 in response to fungal elicitors.

Baldrich P, Kakar K, Siré C, Moreno AB, Berger A, García-Chapa M, López-Moya JJ, Riechmann JL, San Segundo B.

BMC Genomics. 2014 Dec 10;15:1083. doi: 10.1186/1471-2164-15-1083.

4.

Prediction of novel miRNAs and associated target genes in Glycine max.

Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G.

BMC Bioinformatics. 2010 Jan 18;11 Suppl 1:S14. doi: 10.1186/1471-2105-11-S1-S14.

5.

Identification and characterization of small non-coding RNAs from Chinese fir by high throughput sequencing.

Wan LC, Wang F, Guo X, Lu S, Qiu Z, Zhao Y, Zhang H, Lin J.

BMC Plant Biol. 2012 Aug 15;12:146. doi: 10.1186/1471-2229-12-146.

6.

A transgenic transcription factor (TaDREB3) in barley affects the expression of microRNAs and other small non-coding RNAs.

Hackenberg M, Shi BJ, Gustafson P, Langridge P.

PLoS One. 2012;7(8):e42030. doi: 10.1371/journal.pone.0042030. Epub 2012 Aug 1.

7.

Expression of small RNA in Aphis gossypii and its potential role in the resistance interaction with melon.

Sattar S, Addo-Quaye C, Song Y, Anstead JA, Sunkar R, Thompson GA.

PLoS One. 2012;7(11):e48579. doi: 10.1371/journal.pone.0048579. Epub 2012 Nov 16.

8.

In silico identification of conserved microRNAs in large number of diverse plant species.

Sunkar R, Jagadeeswaran G.

BMC Plant Biol. 2008 Apr 16;8:37. doi: 10.1186/1471-2229-8-37.

9.

Plant small RNAs: biogenesis, mode of action and their roles in abiotic stresses.

Guleria P, Mahajan M, Bhardwaj J, Yadav SK.

Genomics Proteomics Bioinformatics. 2011 Dec;9(6):183-99. doi: 10.1016/S1672-0229(11)60022-3. Review.

10.

Dynamic expression of small RNA populations in larch (Larix leptolepis).

Zhang J, Wu T, Li L, Han S, Li X, Zhang S, Qi L.

Planta. 2013 Jan;237(1):89-101. doi: 10.1007/s00425-012-1753-4. Epub 2012 Sep 16.

PMID:
22983700
11.

Specific impact of tobamovirus infection on the Arabidopsis small RNA profile.

Hu Q, Hollunder J, Niehl A, Kørner CJ, Gereige D, Windels D, Arnold A, Kuiper M, Vazquez F, Pooggin M, Heinlein M.

PLoS One. 2011 May 10;6(5):e19549. doi: 10.1371/journal.pone.0019549.

12.

Identification and characterization of maize microRNAs involved in the very early stage of seed germination.

Wang L, Liu H, Li D, Chen H.

BMC Genomics. 2011 Mar 18;12:154. doi: 10.1186/1471-2164-12-154.

13.

Identification of novel Oryza sativa miRNAs in deep sequencing-based small RNA libraries of rice infected with Rice stripe virus.

Guo W, Wu G, Yan F, Lu Y, Zheng H, Lin L, Chen H, Chen J.

PLoS One. 2012;7(10):e46443. doi: 10.1371/journal.pone.0046443. Epub 2012 Oct 10.

14.

Identification of miRNAs and their target genes in developing soybean seeds by deep sequencing.

Song QX, Liu YF, Hu XY, Zhang WK, Ma B, Chen SY, Zhang JS.

BMC Plant Biol. 2011 Jan 10;11:5. doi: 10.1186/1471-2229-11-5.

15.

A comprehensive expression profile of microRNAs and other classes of non-coding small RNAs in barley under phosphorous-deficient and -sufficient conditions.

Hackenberg M, Huang PJ, Huang CY, Shi BJ, Gustafson P, Langridge P.

DNA Res. 2013 Apr;20(2):109-25. doi: 10.1093/dnares/dss037. Epub 2012 Dec 23.

16.

Genome-wide identification of reverse complementary microRNA genes in plants.

Shao C, Ma X, Xu X, Wang H, Meng Y.

PLoS One. 2012;7(10):e46991. doi: 10.1371/journal.pone.0046991. Epub 2012 Oct 23.

17.

Functional characterization of plant small RNAs based on next-generation sequencing data.

Chen M, Meng Y, Gu H, Chen D.

Comput Biol Chem. 2010 Dec;34(5-6):308-12. doi: 10.1016/j.compbiolchem.2010.10.001. Epub 2010 Oct 27.

PMID:
21030312
18.

An array platform for identification of stress-responsive microRNAs in plants.

Jia X, Mendu V, Tang G.

Methods Mol Biol. 2010;639:253-69. doi: 10.1007/978-1-60761-702-0_15.

PMID:
20387051
19.

Divergent patterns of endogenous small RNA populations from seed and vegetative tissues of Glycine max.

Zabala G, Campos E, Varala KK, Bloomfield S, Jones SI, Win H, Tuteja JH, Calla B, Clough SJ, Hudson M, Vodkin LO.

BMC Plant Biol. 2012 Oct 2;12:177. doi: 10.1186/1471-2229-12-177.

20.

Genome wide identification of chilling responsive microRNAs in Prunus persica.

Barakat A, Sriram A, Park J, Zhebentyayeva T, Main D, Abbott A.

BMC Genomics. 2012 Sep 15;13:481. doi: 10.1186/1471-2164-13-481.

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