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Items: 1 to 20 of 104


Quality control genotyping for assessment of genetic identity and purity in diverse tropical maize inbred lines.

Semagn K, Beyene Y, Makumbi D, Mugo S, Prasanna BM, Magorokosho C, Atlin G.

Theor Appl Genet. 2012 Nov;125(7):1487-501. doi: 10.1007/s00122-012-1928-1. Epub 2012 Jul 17.


Molecular characterization of diverse CIMMYT maize inbred lines from eastern and southern Africa using single nucleotide polymorphic markers.

Semagn K, Magorokosho C, Vivek BS, Makumbi D, Beyene Y, Mugo S, Prasanna BM, Warburton ML.

BMC Genomics. 2012 Mar 25;13:113. doi: 10.1186/1471-2164-13-113.


Comparison of Kompetitive Allele Specific PCR (KASP) and genotyping by sequencing (GBS) for quality control analysis in maize.

Ertiro BT, Ogugo V, Worku M, Das B, Olsen M, Labuschagne M, Semagn K.

BMC Genomics. 2015 Nov 6;16:908. doi: 10.1186/s12864-015-2180-2.


A large maize (Zea mays L.) SNP genotyping array: development and germplasm genotyping, and genetic mapping to compare with the B73 reference genome.

Ganal MW, Durstewitz G, Polley A, Bérard A, Buckler ES, Charcosset A, Clarke JD, Graner EM, Hansen M, Joets J, Le Paslier MC, McMullen MD, Montalent P, Rose M, Schön CC, Sun Q, Walter H, Martin OC, Falque M.

PLoS One. 2011;6(12):e28334. doi: 10.1371/journal.pone.0028334. Epub 2011 Dec 8.


Genetic characterization and linkage disequilibrium estimation of a global maize collection using SNP markers.

Yan J, Shah T, Warburton ML, Buckler ES, McMullen MD, Crouch J.

PLoS One. 2009 Dec 24;4(12):e8451. doi: 10.1371/journal.pone.0008451.


Marker-trait association analysis of functional gene markers for provitamin A levels across diverse tropical yellow maize inbred lines.

Azmach G, Gedil M, Menkir A, Spillane C.

BMC Plant Biol. 2013 Dec 28;13:227. doi: 10.1186/1471-2229-13-227.


Population structure and genetic diversity in a commercial maize breeding program assessed with SSR and SNP markers.

Van Inghelandt D, Melchinger AE, Lebreton C, Stich B.

Theor Appl Genet. 2010 May;120(7):1289-99. doi: 10.1007/s00122-009-1256-2. Epub 2010 Jan 10.


Molecular characterization of global maize breeding germplasm based on genome-wide single nucleotide polymorphisms.

Lu Y, Yan J, Guimarães CT, Taba S, Hao Z, Gao S, Chen S, Li J, Zhang S, Vivek BS, Magorokosho C, Mugo S, Makumbi D, Parentoni SN, Shah T, Rong T, Crouch JH, Xu Y.

Theor Appl Genet. 2009 Dec;120(1):93-115. doi: 10.1007/s00122-009-1162-7. Epub 2009 Oct 11.


Development of highly polymorphic SNP markers from the complexity reduced portion of maize [Zea mays L.] genome for use in marker-assisted breeding.

Mammadov JA, Chen W, Ren R, Pai R, Marchione W, Yalçin F, Witsenboer H, Greene TW, Thompson SA, Kumpatla SP.

Theor Appl Genet. 2010 Aug;121(3):577-88. doi: 10.1007/s00122-010-1331-8. Epub 2010 Apr 18.


A powerful tool for genome analysis in maize: development and evaluation of the high density 600 k SNP genotyping array.

Unterseer S, Bauer E, Haberer G, Seidel M, Knaak C, Ouzunova M, Meitinger T, Strom TM, Fries R, Pausch H, Bertani C, Davassi A, Mayer KF, Schön CC.

BMC Genomics. 2014 Sep 29;15:823. doi: 10.1186/1471-2164-15-823.


Genetic diversity of African maize inbred lines revealed by SSR markers.

Legesse BW, Myburg AA, Pixley KV, Botha AM.

Hereditas. 2007 Mar;144(1):10-7.


Analysis of effectiveness of R1-nj anthocyanin marker for in vivo haploid identification in maize and molecular markers for predicting the inhibition of R1-nj expression.

Chaikam V, Nair SK, Babu R, Martinez L, Tejomurtula J, Boddupalli PM.

Theor Appl Genet. 2015 Jan;128(1):159-71. doi: 10.1007/s00122-014-2419-3. Epub 2014 Nov 11.


The Development of Quality Control Genotyping Approaches: A Case Study Using Elite Maize Lines.

Chen J, Zavala C, Ortega N, Petroli C, Franco J, Burgueño J, Costich DE, Hearne SJ.

PLoS One. 2016 Jun 9;11(6):e0157236. doi: 10.1371/journal.pone.0157236. eCollection 2016.


Recovery of exotic alleles in semiexotic maize inbreds derived from crosses between Latin American accessions and a temperate line.

Tarter JA, Goodman MM, Holland JB.

Theor Appl Genet. 2004 Aug;109(3):609-17. Epub 2004 Apr 17.


Identification of functional genetic variations underlying drought tolerance in maize using SNP markers.

Hao Z, Li X, Xie C, Weng J, Li M, Zhang D, Liang X, Liu L, Liu S, Zhang S.

J Integr Plant Biol. 2011 Aug;53(8):641-52. doi: 10.1111/j.1744-7909.2011.01051.x. Epub 2011 Jul 19.


Grouping of tropical mid-altitude maize inbred lines on the basis of yield data and molecular markers.

Menkir A, Melake-Berhan A, The C, Ingelbrecht I, Adepoju A.

Theor Appl Genet. 2004 May;108(8):1582-90. Epub 2004 Feb 20.


Comprehensive genotyping of the USA national maize inbred seed bank.

Romay MC, Millard MJ, Glaubitz JC, Peiffer JA, Swarts KL, Casstevens TM, Elshire RJ, Acharya CB, Mitchell SE, Flint-Garcia SA, McMullen MD, Holland JB, Buckler ES, Gardner CA.

Genome Biol. 2013 Jun 11;14(6):R55. doi: 10.1186/gb-2013-14-6-r55.


Molecular characterization of CIMMYT maize inbred lines with genotyping-by-sequencing SNPs.

Wu Y, San Vicente F, Huang K, Dhliwayo T, Costich DE, Semagn K, Sudha N, Olsen M, Prasanna BM, Zhang X, Babu R.

Theor Appl Genet. 2016 Apr;129(4):753-65. doi: 10.1007/s00122-016-2664-8. Epub 2016 Feb 5.


Fine genetic characterization of elite maize germplasm using high-throughput SNP genotyping.

Wu X, Li Y, Shi Y, Song Y, Wang T, Huang Y, Li Y.

Theor Appl Genet. 2014 Mar;127(3):621-31. doi: 10.1007/s00122-013-2246-y. Epub 2013 Dec 18.

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