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Results: 1 to 20 of 141

1.

A comparison of transcriptome and epigenetic status between closely related species in the genus Arabidopsis.

Kawanabe T, Fujimoto R, Sasaki T, Taylor JM, Dennis ES.

Gene. 2012 Sep 15;506(2):301-9. doi: 10.1016/j.gene.2012.07.003. Epub 2012 Jul 13.

PMID:
22796129
[PubMed - indexed for MEDLINE]
2.

Evolution and control of imprinted FWA genes in the genus Arabidopsis.

Fujimoto R, Kinoshita Y, Kawabe A, Kinoshita T, Takashima K, Nordborg M, Nasrallah ME, Shimizu KK, Kudoh H, Kakutani T.

PLoS Genet. 2008 Apr 4;4(4):e1000048. doi: 10.1371/journal.pgen.1000048.

PMID:
18389059
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Genome-wide analysis of cis-regulatory divergence between species in the Arabidopsis genus.

He F, Zhang X, Hu J, Turck F, Dong X, Goebel U, Borevitz J, de Meaux J.

Mol Biol Evol. 2012 Nov;29(11):3385-95. doi: 10.1093/molbev/mss146. Epub 2012 May 28.

PMID:
22641789
[PubMed - indexed for MEDLINE]
Free Article
4.
5.

Widespread interspecific divergence in cis-regulation of transposable elements in the Arabidopsis genus.

He F, Zhang X, Hu JY, Turck F, Dong X, Goebel U, Borevitz JO, de Meaux J.

Mol Biol Evol. 2012 Mar;29(3):1081-91. doi: 10.1093/molbev/msr281. Epub 2011 Nov 15.

PMID:
22086904
[PubMed - indexed for MEDLINE]
Free Article
6.

Transposable elements and small RNAs contribute to gene expression divergence between Arabidopsis thaliana and Arabidopsis lyrata.

Hollister JD, Smith LM, Guo YL, Ott F, Weigel D, Gaut BS.

Proc Natl Acad Sci U S A. 2011 Feb 8;108(6):2322-7. doi: 10.1073/pnas.1018222108. Epub 2011 Jan 20.

PMID:
21252301
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Epigenetic variation in the FWA gene within the genus Arabidopsis.

Fujimoto R, Sasaki T, Kudoh H, Taylor JM, Kakutani T, Dennis ES.

Plant J. 2011 Jun;66(5):831-43. doi: 10.1111/j.1365-313X.2011.04549.x. Epub 2011 Apr 4.

PMID:
21457364
[PubMed - indexed for MEDLINE]
8.

Genome wide gene expression in artificially synthesized amphidiploids of Arabidopsis.

Fujimoto R, Taylor JM, Sasaki T, Kawanabe T, Dennis ES.

Plant Mol Biol. 2011 Nov;77(4-5):419-31. doi: 10.1007/s11103-011-9820-y. Epub 2011 Sep 1.

PMID:
21882042
[PubMed - indexed for MEDLINE]
9.

Identification of imprinted genes subject to parent-of-origin specific expression in Arabidopsis thaliana seeds.

McKeown PC, Laouielle-Duprat S, Prins P, Wolff P, Schmid MW, Donoghue MT, Fort A, Duszynska D, Comte A, Lao NT, Wennblom TJ, Smant G, Köhler C, Grossniklaus U, Spillane C.

BMC Plant Biol. 2011 Aug 12;11:113. doi: 10.1186/1471-2229-11-113.

PMID:
21838868
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Duplicate genes increase expression diversity in closely related species and allopolyploids.

Ha M, Kim ED, Chen ZJ.

Proc Natl Acad Sci U S A. 2009 Feb 17;106(7):2295-300. doi: 10.1073/pnas.0807350106. Epub 2009 Jan 23.

PMID:
19168631
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Epigenetic natural variation in Arabidopsis thaliana.

Vaughn MW, Tanurdzić M, Lippman Z, Jiang H, Carrasquillo R, Rabinowicz PD, Dedhia N, McCombie WR, Agier N, Bulski A, Colot V, Doerge RW, Martienssen RA.

PLoS Biol. 2007 Jul;5(7):e174. Epub 2007 Jun 19.

PMID:
17579518
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Multilocus analysis of variation and speciation in the closely related species Arabidopsis halleri and A. lyrata.

Ramos-Onsins SE, Stranger BE, Mitchell-Olds T, Aguadé M.

Genetics. 2004 Jan;166(1):373-88. Erratum in: Genetics. 2004 Aug;167(4):2143.

PMID:
15020431
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Nonadditive regulation of FRI and FLC loci mediates flowering-time variation in Arabidopsis allopolyploids.

Wang J, Tian L, Lee HS, Chen ZJ.

Genetics. 2006 Jun;173(2):965-74. Epub 2006 Mar 17.

PMID:
16547097
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Genome-wide high-resolution mapping and functional analysis of DNA methylation in arabidopsis.

Zhang X, Yazaki J, Sundaresan A, Cokus S, Chan SW, Chen H, Henderson IR, Shinn P, Pellegrini M, Jacobsen SE, Ecker JR.

Cell. 2006 Sep 22;126(6):1189-201. Epub 2006 Aug 31.

PMID:
16949657
[PubMed - indexed for MEDLINE]
Free Article
15.

Divergent evolutionary and expression patterns between lineage specific new duplicate genes and their parental paralogs in Arabidopsis thaliana.

Wang J, Marowsky NC, Fan C.

PLoS One. 2013 Aug 29;8(8):e72362. doi: 10.1371/journal.pone.0072362. eCollection 2013.

PMID:
24009676
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Site-specific methylation in gene coding region underlies transcriptional silencing of the Phytochrome A epiallele in Arabidopsis thaliana.

Rangani G, Khodakovskaya M, Alimohammadi M, Hoecker U, Srivastava V.

Plant Mol Biol. 2012 May;79(1-2):191-202. doi: 10.1007/s11103-012-9906-1. Epub 2012 Apr 1.

PMID:
22466452
[PubMed - indexed for MEDLINE]
17.

Floral and insect-induced volatile formation in Arabidopsis lyrata ssp. petraea, a perennial, outcrossing relative of A. thaliana.

Abel C, Clauss M, Schaub A, Gershenzon J, Tholl D.

Planta. 2009 Jun;230(1):1-11. doi: 10.1007/s00425-009-0921-7. Epub 2009 Mar 26.

PMID:
19322583
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

AtMBD9 modulates Arabidopsis development through the dual epigenetic pathways of DNA methylation and histone acetylation.

Yaish MW, Peng M, Rothstein SJ.

Plant J. 2009 Jul;59(1):123-35. doi: 10.1111/j.1365-313X.2009.03860.x. Epub 2009 Mar 27.

PMID:
19419532
[PubMed - indexed for MEDLINE]
19.

Deposition of histone variant H2A.Z within gene bodies regulates responsive genes.

Coleman-Derr D, Zilberman D.

PLoS Genet. 2012;8(10):e1002988. doi: 10.1371/journal.pgen.1002988. Epub 2012 Oct 11.

PMID:
23071449
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Evolutionary origins of Brassicaceae specific genes in Arabidopsis thaliana.

Donoghue MT, Keshavaiah C, Swamidatta SH, Spillane C.

BMC Evol Biol. 2011 Feb 18;11:47. doi: 10.1186/1471-2148-11-47.

PMID:
21332978
[PubMed - indexed for MEDLINE]
Free PMC Article
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