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Items: 1 to 20 of 182

1.

Metagenome, metatranscriptome and single-cell sequencing reveal microbial response to Deepwater Horizon oil spill.

Mason OU, Hazen TC, Borglin S, Chain PS, Dubinsky EA, Fortney JL, Han J, Holman HY, Hultman J, Lamendella R, Mackelprang R, Malfatti S, Tom LM, Tringe SG, Woyke T, Zhou J, Rubin EM, Jansson JK.

ISME J. 2012 Sep;6(9):1715-27. doi: 10.1038/ismej.2012.59. Epub 2012 Jun 21.

2.

Single-cell genomics reveals features of a Colwellia species that was dominant during the Deepwater Horizon oil spill.

Mason OU, Han J, Woyke T, Jansson JK.

Front Microbiol. 2014 Jul 8;5:332. doi: 10.3389/fmicb.2014.00332. eCollection 2014.

3.

Metagenomics reveals sediment microbial community response to Deepwater Horizon oil spill.

Mason OU, Scott NM, Gonzalez A, Robbins-Pianka A, Bælum J, Kimbrel J, Bouskill NJ, Prestat E, Borglin S, Joyner DC, Fortney JL, Jurelevicius D, Stringfellow WT, Alvarez-Cohen L, Hazen TC, Knight R, Gilbert JA, Jansson JK.

ISME J. 2014 Jul;8(7):1464-75. doi: 10.1038/ismej.2013.254. Epub 2014 Jan 23.

4.

Hydrocarbon-degrading bacteria enriched by the Deepwater Horizon oil spill identified by cultivation and DNA-SIP.

Gutierrez T, Singleton DR, Berry D, Yang T, Aitken MD, Teske A.

ISME J. 2013 Nov;7(11):2091-104. doi: 10.1038/ismej.2013.98. Epub 2013 Jun 20.

5.

Deep-sea oil plume enriches indigenous oil-degrading bacteria.

Hazen TC, Dubinsky EA, DeSantis TZ, Andersen GL, Piceno YM, Singh N, Jansson JK, Probst A, Borglin SE, Fortney JL, Stringfellow WT, Bill M, Conrad ME, Tom LM, Chavarria KL, Alusi TR, Lamendella R, Joyner DC, Spier C, Baelum J, Auer M, Zemla ML, Chakraborty R, Sonnenthal EL, D'haeseleer P, Holman HY, Osman S, Lu Z, Van Nostrand JD, Deng Y, Zhou J, Mason OU.

Science. 2010 Oct 8;330(6001):204-8. doi: 10.1126/science.1195979. Epub 2010 Aug 24.

6.

Microbial community analysis of Deepwater Horizon oil-spill impacted sites along the Gulf coast using functional and phylogenetic markers.

Looper JK, Cotto A, Kim BY, Lee MK, Liles MR, Ní Chadhain SM, Son A.

Environ Sci Process Impacts. 2013 Oct;15(11):2068-79. doi: 10.1039/c3em00200d.

PMID:
24061682
7.

Hydrocarbon-degrading bacteria and the bacterial community response in gulf of Mexico beach sands impacted by the deepwater horizon oil spill.

Kostka JE, Prakash O, Overholt WA, Green SJ, Freyer G, Canion A, Delgardio J, Norton N, Hazen TC, Huettel M.

Appl Environ Microbiol. 2011 Nov;77(22):7962-74. doi: 10.1128/AEM.05402-11. Epub 2011 Sep 23.

8.

Deep-sea bacteria enriched by oil and dispersant from the Deepwater Horizon spill.

Baelum J, Borglin S, Chakraborty R, Fortney JL, Lamendella R, Mason OU, Auer M, Zemla M, Bill M, Conrad ME, Malfatti SA, Tringe SG, Holman HY, Hazen TC, Jansson JK.

Environ Microbiol. 2012 Sep;14(9):2405-16. doi: 10.1111/j.1462-2920.2012.02780.x. Epub 2012 May 23.

PMID:
22616650
9.

Microbial gene functions enriched in the Deepwater Horizon deep-sea oil plume.

Lu Z, Deng Y, Van Nostrand JD, He Z, Voordeckers J, Zhou A, Lee YJ, Mason OU, Dubinsky EA, Chavarria KL, Tom LM, Fortney JL, Lamendella R, Jansson JK, D'haeseleer P, Hazen TC, Zhou J.

ISME J. 2012 Feb;6(2):451-60. doi: 10.1038/ismej.2011.91. Epub 2011 Aug 4.

10.

Succession of hydrocarbon-degrading bacteria in the aftermath of the deepwater horizon oil spill in the gulf of Mexico.

Dubinsky EA, Conrad ME, Chakraborty R, Bill M, Borglin SE, Hollibaugh JT, Mason OU, M Piceno Y, Reid FC, Stringfellow WT, Tom LM, Hazen TC, Andersen GL.

Environ Sci Technol. 2013 Oct 1;47(19):10860-7. doi: 10.1021/es401676y. Epub 2013 Sep 19.

PMID:
23937111
11.

Natural gas and temperature structured a microbial community response to the Deepwater Horizon oil spill.

Redmond MC, Valentine DL.

Proc Natl Acad Sci U S A. 2012 Dec 11;109(50):20292-7. doi: 10.1073/pnas.1108756108. Epub 2011 Oct 3.

12.

Assessment of the Deepwater Horizon oil spill impact on Gulf coast microbial communities.

Lamendella R, Strutt S, Borglin S, Chakraborty R, Tas N, Mason OU, Hultman J, Prestat E, Hazen TC, Jansson JK.

Front Microbiol. 2014 Apr 3;5:130. doi: 10.3389/fmicb.2014.00130. eCollection 2014.

13.

Novel hydrocarbon monooxygenase genes in the metatranscriptome of a natural deep-sea hydrocarbon plume.

Li M, Jain S, Baker BJ, Taylor C, Dick GJ.

Environ Microbiol. 2014 Jan;16(1):60-71. doi: 10.1111/1462-2920.12182. Epub 2013 Jul 4.

PMID:
23826624
14.

Role of methylotrophs in the degradation of hydrocarbons during the Deepwater Horizon oil spill.

Gutierrez T, Aitken MD.

ISME J. 2014 Dec;8(12):2543-5. doi: 10.1038/ismej.2014.88. Epub 2014 May 27.

15.

Regime shift in sandy beach microbial communities following Deepwater Horizon oil spill remediation efforts.

Engel AS, Gupta AA.

PLoS One. 2014 Jul 18;9(7):e102934. doi: 10.1371/journal.pone.0102934. eCollection 2014.

16.

The polycyclic aromatic hydrocarbon degradation potential of Gulf of Mexico native coastal microbial communities after the Deepwater Horizon oil spill.

Kappell AD, Wei Y, Newton RJ, Van Nostrand JD, Zhou J, McLellan SL, Hristova KR.

Front Microbiol. 2014 May 9;5:205. doi: 10.3389/fmicb.2014.00205. eCollection 2014.

17.

Metagenomic analysis and metabolite profiling of deep-sea sediments from the Gulf of Mexico following the Deepwater Horizon oil spill.

Kimes NE, Callaghan AV, Aktas DF, Smith WL, Sunner J, Golding B, Drozdowska M, Hazen TC, Suflita JM, Morris PJ.

Front Microbiol. 2013 Mar 15;4:50. doi: 10.3389/fmicb.2013.00050. eCollection 2013.

18.

Tracking hydrocarbon plume transport and biodegradation at Deepwater Horizon.

Camilli R, Reddy CM, Yoerger DR, Van Mooy BA, Jakuba MV, Kinsey JC, McIntyre CP, Sylva SP, Maloney JV.

Science. 2010 Oct 8;330(6001):201-4. doi: 10.1126/science.1195223. Epub 2010 Aug 19.

19.

Microbial metatranscriptomics in a permanent marine oxygen minimum zone.

Stewart FJ, Ulloa O, DeLong EF.

Environ Microbiol. 2012 Jan;14(1):23-40. doi: 10.1111/j.1462-2920.2010.02400.x. Epub 2011 Jan 7.

PMID:
21210935
20.

Initial community and environment determine the response of bacterial communities to dispersant and oil contamination.

Ortmann AC, Lu Y.

Mar Pollut Bull. 2015 Jan 15;90(1-2):106-14. doi: 10.1016/j.marpolbul.2014.11.013. Epub 2014 Dec 6.

PMID:
25487088
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