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Results: 1 to 20 of 92

1.

New meta-analysis tools reveal common transcriptional regulatory basis for multiple determinants of behavior.

Ament SA, Blatti CA, Alaux C, Wheeler MM, Toth AL, Le Conte Y, Hunt GJ, Guzmán-Novoa E, Degrandi-Hoffman G, Uribe-Rubio JL, Amdam GV, Page RE Jr, Rodriguez-Zas SL, Robinson GE, Sinha S.

Proc Natl Acad Sci U S A. 2012 Jun 26;109(26):E1801-10. doi: 10.1073/pnas.1205283109. Epub 2012 Jun 12.

PMID:
22691501
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Integrated computational and experimental analysis of the neuroendocrine transcriptome in genetic hypertension identifies novel control points for the cardiometabolic syndrome.

Friese RS, Ye C, Nievergelt CM, Schork AJ, Mahapatra NR, Rao F, Napolitan PS, Waalen J, Ehret GB, Munroe PB, Schmid-Schönbein GW, Eskin E, O'Connor DT.

Circ Cardiovasc Genet. 2012 Aug 1;5(4):430-40. doi: 10.1161/CIRCGENETICS.111.962415. Epub 2012 Jun 5.

PMID:
22670052
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Meta-analysis of genome-wide expression patterns associated with behavioral maturation in honey bees.

Adams HA, Southey BR, Robinson GE, Rodriguez-Zas SL.

BMC Genomics. 2008 Oct 24;9:503. doi: 10.1186/1471-2164-9-503.

PMID:
18950506
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Behavior-specific changes in transcriptional modules lead to distinct and predictable neurogenomic states.

Chandrasekaran S, Ament SA, Eddy JA, Rodriguez-Zas SL, Schatz BR, Price ND, Robinson GE.

Proc Natl Acad Sci U S A. 2011 Nov 1;108(44):18020-5. doi: 10.1073/pnas.1114093108. Epub 2011 Sep 29.

PMID:
21960440
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Molecular determinants of scouting behavior in honey bees.

Liang ZS, Nguyen T, Mattila HR, Rodriguez-Zas SL, Seeley TD, Robinson GE.

Science. 2012 Mar 9;335(6073):1225-8. doi: 10.1126/science.1213962.

PMID:
22403390
[PubMed - indexed for MEDLINE]
Free Article
6.
7.

The transcription factor ultraspiracle influences honey bee social behavior and behavior-related gene expression.

Ament SA, Wang Y, Chen CC, Blatti CA, Hong F, Liang ZS, Negre N, White KP, Rodriguez-Zas SL, Mizzen CA, Sinha S, Zhong S, Robinson GE.

PLoS Genet. 2012;8(3):e1002596. doi: 10.1371/journal.pgen.1002596. Epub 2012 Mar 29.

PMID:
22479195
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Genome scan for cis-regulatory DNA motifs associated with social behavior in honey bees.

Sinha S, Ling X, Whitfield CW, Zhai C, Robinson GE.

Proc Natl Acad Sci U S A. 2006 Oct 31;103(44):16352-7. Epub 2006 Oct 25.

PMID:
17065326
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Honey bee aggression supports a link between gene regulation and behavioral evolution.

Alaux C, Sinha S, Hasadsri L, Hunt GJ, Guzmán-Novoa E, DeGrandi-Hoffman G, Uribe-Rubio JL, Southey BR, Rodriguez-Zas S, Robinson GE.

Proc Natl Acad Sci U S A. 2009 Sep 8;106(36):15400-5. doi: 10.1073/pnas.0907043106. Epub 2009 Aug 21.

PMID:
19706434
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Advancing the understanding of the embryo transcriptome co-regulation using meta-, functional, and gene network analysis tools.

Rodriguez-Zas SL, Ko Y, Adams HA, Southey BR.

Reproduction. 2008 Feb;135(2):213-24. doi: 10.1530/REP-07-0391.

PMID:
18239050
[PubMed - indexed for MEDLINE]
Free Article
11.

Computational discovery of transcriptional regulatory rules.

Pham TH, Clemente JC, Satou K, Ho TB.

Bioinformatics. 2005 Sep 1;21 Suppl 2:ii101-7.

PMID:
16204087
[PubMed - indexed for MEDLINE]
Free Article
12.

Species differences in brain gene expression profiles associated with adult behavioral maturation in honey bees.

Sen Sarma M, Whitfield CW, Robinson GE.

BMC Genomics. 2007 Jun 29;8:202.

PMID:
17603883
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Porcine tissue-specific regulatory networks derived from meta-analysis of the transcriptome.

Pérez-Montarelo D, Hudson NJ, Fernández AI, Ramayo-Caldas Y, Dalrymple BP, Reverter A.

PLoS One. 2012;7(9):e46159. doi: 10.1371/journal.pone.0046159. Epub 2012 Sep 26.

PMID:
23049964
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

The cardiac transcription network modulated by Gata4, Mef2a, Nkx2.5, Srf, histone modifications, and microRNAs.

Schlesinger J, Schueler M, Grunert M, Fischer JJ, Zhang Q, Krueger T, Lange M, Tönjes M, Dunkel I, Sperling SR.

PLoS Genet. 2011 Feb;7(2):e1001313. doi: 10.1371/journal.pgen.1001313. Epub 2011 Feb 17.

PMID:
21379568
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Meta-analysis of breast cancer microarray studies in conjunction with conserved cis-elements suggest patterns for coordinate regulation.

Smith DD, Saetrom P, Snøve O Jr, Lundberg C, Rivas GE, Glackin C, Larson GP.

BMC Bioinformatics. 2008 Jan 28;9:63. doi: 10.1186/1471-2105-9-63.

PMID:
18226260
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Individual variation in pheromone response correlates with reproductive traits and brain gene expression in worker honey bees.

Kocher SD, Ayroles JF, Stone EA, Grozinger CM.

PLoS One. 2010 Feb 9;5(2):e9116. doi: 10.1371/journal.pone.0009116.

PMID:
20161742
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Statistical Test of Expression Pattern (STEPath): a new strategy to integrate gene expression data with genomic information in individual and meta-analysis studies.

Martini P, Risso D, Sales G, Romualdi C, Lanfranchi G, Cagnin S.

BMC Bioinformatics. 2011 Apr 11;12:92. doi: 10.1186/1471-2105-12-92.

PMID:
21481242
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Statistical methods in integrative analysis for gene regulatory modules.

Zeng L, Wu J, Xie J.

Stat Appl Genet Mol Biol. 2008;7(1):Article 28. doi: 10.2202/1544-6115.1369. Epub 2008 Oct 10.

PMID:
18976224
[PubMed - indexed for MEDLINE]
19.

Uncovering cis-regulatory sequence requirements for context-specific transcription factor binding.

Yáñez-Cuna JO, Dinh HQ, Kvon EZ, Shlyueva D, Stark A.

Genome Res. 2012 Oct;22(10):2018-30. doi: 10.1101/gr.132811.111. Epub 2012 Apr 25.

PMID:
22534400
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

De novo transcriptome sequencing in a songbird, the dark-eyed junco (Junco hyemalis): genomic tools for an ecological model system.

Peterson MP, Whittaker DJ, Ambreth S, Sureshchandra S, Buechlein A, Podicheti R, Choi JH, Lai Z, Mockatis K, Colbourne J, Tang H, Ketterson ED.

BMC Genomics. 2012 Jul 9;13:305. doi: 10.1186/1471-2164-13-305.

PMID:
22776250
[PubMed - indexed for MEDLINE]
Free PMC Article

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