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Results: 1 to 20 of 98

1.

Complete genome sequence of Paenibacillus sp. strain JDR-2.

Chow V, Nong G, St John FJ, Rice JD, Dickstein E, Chertkov O, Bruce D, Detter C, Brettin T, Han J, Woyke T, Pitluck S, Nolan M, Pati A, Martin J, Copeland A, Land ML, Goodwin L, Jones JB, Ingram LO, Shanmugam KT, Preston JF.

Stand Genomic Sci. 2012 Mar 19;6(1):1-10. doi: 10.4056/sigs.2374349. Epub 2012 Mar 5.

PMID:
22675593
[PubMed]
Free PMC Article
2.

Structure, function, and regulation of the aldouronate utilization gene cluster from Paenibacillus sp. strain JDR-2.

Chow V, Nong G, Preston JF.

J Bacteriol. 2007 Dec;189(24):8863-70. Epub 2007 Oct 5.

PMID:
17921311
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Aldouronate utilization in Paenibacillus sp. strain JDR-2: Physiological and enzymatic evidence for coupling of extracellular depolymerization and intracellular metabolism.

Nong G, Rice JD, Chow V, Preston JF.

Appl Environ Microbiol. 2009 Jul;75(13):4410-8. doi: 10.1128/AEM.02354-08. Epub 2009 Apr 24.

PMID:
19395566
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Paenibacillus sp. strain JDR-2 and XynA1: a novel system for methylglucuronoxylan utilization.

Stjohn FJ, Rice JD, Preston JF.

Appl Environ Microbiol. 2006 Feb;72(2):1496-506.

PMID:
16461704
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Complete fermentation of xylose and methylglucuronoxylose derived from methylglucuronoxylan by Enterobacter asburiae strain JDR-1.

Bi C, Rice JD, Preston JF.

Appl Environ Microbiol. 2009 Jan;75(2):395-404. doi: 10.1128/AEM.01941-08. Epub 2008 Nov 14.

PMID:
19011070
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Genome sequence of the pattern forming Paenibacillus vortex bacterium reveals potential for thriving in complex environments.

Sirota-Madi A, Olender T, Helman Y, Ingham C, Brainis I, Roth D, Hagi E, Brodsky L, Leshkowitz D, Galatenko V, Nikolaev V, Mugasimangalam RC, Bransburg-Zabary S, Gutnick DL, Lancet D, Ben-Jacob E.

BMC Genomics. 2010 Dec 17;11:710. doi: 10.1186/1471-2164-11-710.

PMID:
21167037
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Genetic engineering of Enterobacter asburiae strain JDR-1 for efficient D(--) lactic acid production from hemicellulose hydrolysate.

Bi C, Zhang X, Rice JD, Ingram LO, Preston JF.

Biotechnol Lett. 2009 Oct;31(10):1551-7. doi: 10.1007/s10529-009-0044-z. Epub 2009 Jun 6.

PMID:
19504045
[PubMed - indexed for MEDLINE]
8.

Non-contiguous finished genome sequence and description of Paenibacillus senegalensis sp. nov.

Mishra AK, Lagier JC, Rivet R, Raoult D, Fournier PE.

Stand Genomic Sci. 2012 Oct 10;7(1):70-81. doi: 10.4056/sigs.3056450. Epub 2012 Sep 24.

PMID:
23459006
[PubMed]
Free PMC Article
9.

Novel structural features of xylanase A1 from Paenibacillus sp. JDR-2.

St John FJ, Preston JF, Pozharski E.

J Struct Biol. 2012 Nov;180(2):303-11. doi: 10.1016/j.jsb.2012.09.007. Epub 2012 Sep 18.

PMID:
23000703
[PubMed - indexed for MEDLINE]
10.

Complete genome sequence of Cellulomonas flavigena type strain (134).

Abt B, Foster B, Lapidus A, Clum A, Sun H, Pukall R, Lucas S, Glavina Del Rio T, Nolan M, Tice H, Cheng JF, Pitluck S, Liolios K, Ivanova N, Mavromatis K, Ovchinnikova G, Pati A, Goodwin L, Chen A, Palaniappan K, Land M, Hauser L, Chang YJ, Jeffries CD, Rohde M, Göker M, Woyke T, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP.

Stand Genomic Sci. 2010 Jul 29;3(1):15-25. doi: 10.4056/sigs.1012662.

PMID:
21304688
[PubMed]
Free PMC Article
11.

Paenibacillus xylanilyticus sp. nov., an airborne xylanolytic bacterium.

Rivas R, Mateos PF, Martínez-Molina E, Velázquez E.

Int J Syst Evol Microbiol. 2005 Jan;55(Pt 1):405-8.

PMID:
15653909
[PubMed - indexed for MEDLINE]
Free Article
12.

Paenibacillus woosongensis sp. nov., a xylanolytic bacterium isolated from forest soil.

Lee JC, Yoon KH.

Int J Syst Evol Microbiol. 2008 Mar;58(Pt 3):612-6. doi: 10.1099/ijs.0.65350-0.

PMID:
18319465
[PubMed - indexed for MEDLINE]
Free Article
13.

Deciphering the role of Paenibacillus strain Q8 in the organic matter recycling in the acid mine drainage of Carnoulès.

Delavat F, Phalip V, Forster A, Lett MC, Lièvremont D.

Microb Cell Fact. 2012 Feb 3;11:16. doi: 10.1186/1475-2859-11-16.

PMID:
22305268
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Paenibacillus xylaniclasticus sp. nov., a xylanolytic-cellulolytic bacterium isolated from sludge in an anaerobic digester.

Tachaapaikoon C, Tanasupawat S, Pason P, Sornyotha S, Waeonukul R, Kyu KL, Ratanakhanokchai K.

J Microbiol. 2012 Jun;50(3):394-400. doi: 10.1007/s12275-012-1480-3. Epub 2012 Jun 30.

PMID:
22752902
[PubMed - indexed for MEDLINE]
15.

Complete genome sequence of Beutenbergia cavernae type strain (HKI 0122).

Land M, Pukall R, Abt B, Göker M, Rohde M, Glavina Del Rio T, Tice H, Copeland A, Cheng JF, Lucas S, Chen F, Nolan M, Bruce D, Goodwin L, Pitluck S, Ivanova N, Mavromatis K, Ovchinnikova G, Pati A, Chen A, Palaniappan K, Hauser L, Chang YJ, Jefferies CC, Saunders E, Brettin T, Detter JC, Han C, Chain P, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP, Lapidus A.

Stand Genomic Sci. 2009 Jul 20;1(1):21-8. doi: 10.4056/sigs.1162.

PMID:
21304633
[PubMed]
Free PMC Article
16.

Complete genome sequence of Kytococcus sedentarius type strain (541).

Sims D, Brettin T, Detter JC, Han C, Lapidus A, Copeland A, Glavina Del Rio T, Nolan M, Chen F, Lucas S, Tice H, Cheng JF, Bruce D, Goodwin L, Pitluck S, Ovchinnikova G, Pati A, Ivanova N, Mavrommatis K, Chen A, Palaniappan K, D'haeseleer P, Chain P, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Schneider S, Göker M, Pukall R, Kyrpides NC, Klenk HP.

Stand Genomic Sci. 2009 Jul 20;1(1):12-20. doi: 10.4056/sigs.761.

PMID:
21304632
[PubMed]
Free PMC Article
17.

Complete genome sequence of Pedobacter heparinus type strain (HIM 762-3).

Han C, Spring S, Lapidus A, Del Rio TG, Tice H, Copeland A, Cheng JF, Lucas S, Chen F, Nolan M, Bruce D, Goodwin L, Pitluck S, Ivanova N, Mavromatis K, Mikhailova N, Pati A, Chen A, Palaniappan K, Land M, Hauser L, Chang YJ, Jeffries CC, Saunders E, Chertkov O, Brettin T, Göker M, Rohde M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP, Detter JC.

Stand Genomic Sci. 2009 Jul 20;1(1):54-62. doi: 10.4056/sigs.22138.

PMID:
21304637
[PubMed]
Free PMC Article
18.

Paenibacillus sediminis sp. nov., a xylanolytic bacterium isolated from a tidal flat.

Wang L, Baek SH, Cui Y, Lee HG, Lee ST.

Int J Syst Evol Microbiol. 2012 Jun;62(Pt 6):1284-8. doi: 10.1099/ijs.0.032102-0. Epub 2011 Jul 22.

PMID:
21784963
[PubMed - indexed for MEDLINE]
Free Article
19.

Genome sequence and description of Aeromicrobium massiliense sp. nov.

Ramasamy D, Kokcha S, Lagier JC, Nguyen TT, Raoult D, Fournier PE.

Stand Genomic Sci. 2012 Dec 19;7(2):246-57. doi: 10.4056/sigs.3306717. Epub 2012 Nov 15.

PMID:
23408663
[PubMed]
Free PMC Article
20.

Complete genome sequence of Brachybacterium faecium type strain (Schefferle 6-10).

Lapidus A, Pukall R, Labuttii K, Copeland A, Del Rio TG, Nolan M, Chen F, Lucas S, Tice H, Cheng JF, Bruce D, Goodwin L, Pitluck S, Rohde M, Göker M, Pati A, Ivanova N, Mavrommatis K, Chen A, Palaniappan K, D'haeseleer P, Chain P, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP.

Stand Genomic Sci. 2009 Jul 20;1(1):3-11. doi: 10.4056/sigs.492.

PMID:
21304631
[PubMed]
Free PMC Article

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