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Results: 1 to 20 of 143

1.

Influence of cobalamin scarcity on diatom molecular physiology and identification of a cobalamin acquisition protein.

Bertrand EM, Allen AE, Dupont CL, Norden-Krichmar TM, Bai J, Valas RE, Saito MA.

Proc Natl Acad Sci U S A. 2012 Jun 26;109(26):E1762-71. doi: 10.1073/pnas.1201731109. Epub 2012 May 31.

PMID:
22652568
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

The transcriptome and proteome of the diatom Thalassiosira pseudonana reveal a diverse phosphorus stress response.

Dyhrman ST, Jenkins BD, Rynearson TA, Saito MA, Mercier ML, Alexander H, Whitney LP, Drzewianowski A, Bulygin VV, Bertrand EM, Wu Z, Benitez-Nelson C, Heithoff A.

PLoS One. 2012;7(3):e33768. doi: 10.1371/journal.pone.0033768. Epub 2012 Mar 29.

PMID:
22479440
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

A model for carbohydrate metabolism in the diatom Phaeodactylum tricornutum deduced from comparative whole genome analysis.

Kroth PG, Chiovitti A, Gruber A, Martin-Jezequel V, Mock T, Parker MS, Stanley MS, Kaplan A, Caron L, Weber T, Maheswari U, Armbrust EV, Bowler C.

PLoS One. 2008 Jan 9;3(1):e1426. doi: 10.1371/journal.pone.0001426.

PMID:
18183306
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Whole-genome expression analysis reveals a role for death-related genes in stress acclimation of the diatom Thalassiosira pseudonana.

Thamatrakoln K, Korenovska O, Niheu AK, Bidle KD.

Environ Microbiol. 2012 Jan;14(1):67-81. doi: 10.1111/j.1462-2920.2011.02468.x. Epub 2011 Mar 31.

PMID:
21453404
[PubMed - indexed for MEDLINE]
5.

SLC4 family transporters in a marine diatom directly pump bicarbonate from seawater.

Nakajima K, Tanaka A, Matsuda Y.

Proc Natl Acad Sci U S A. 2013 Jan 29;110(5):1767-72. doi: 10.1073/pnas.1216234110. Epub 2013 Jan 7.

PMID:
23297242
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Insights into the evolution of vitamin B12 auxotrophy from sequenced algal genomes.

Helliwell KE, Wheeler GL, Leptos KC, Goldstein RE, Smith AG.

Mol Biol Evol. 2011 Oct;28(10):2921-33. doi: 10.1093/molbev/msr124. Epub 2011 May 6.

PMID:
21551270
[PubMed - indexed for MEDLINE]
Free Article
7.

The response of diatom central carbon metabolism to nitrogen starvation is different from that of green algae and higher plants.

Hockin NL, Mock T, Mulholland F, Kopriva S, Malin G.

Plant Physiol. 2012 Jan;158(1):299-312. doi: 10.1104/pp.111.184333. Epub 2011 Nov 7.

PMID:
22065419
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Potential impact of stress activated retrotransposons on genome evolution in a marine diatom.

Maumus F, Allen AE, Mhiri C, Hu H, Jabbari K, Vardi A, Grandbastien MA, Bowler C.

BMC Genomics. 2009 Dec 22;10:624. doi: 10.1186/1471-2164-10-624.

PMID:
20028555
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Evolution and functional diversification of fructose bisphosphate aldolase genes in photosynthetic marine diatoms.

Allen AE, Moustafa A, Montsant A, Eckert A, Kroth PG, Bowler C.

Mol Biol Evol. 2012 Jan;29(1):367-79. doi: 10.1093/molbev/msr223. Epub 2011 Sep 8.

PMID:
21903677
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Expression and regulation of carbonic anhydrases in the marine diatom Thalassiosira pseudonana and in natural phytoplankton assemblages from Great Bay, New Jersey.

McGinn PJ, Morel FM.

Physiol Plant. 2008 May;133(1):78-91. doi: 10.1111/j.1399-3054.2007.01039.x.

PMID:
18405334
[PubMed - indexed for MEDLINE]
11.

Whole transcriptome analysis of the silicon response of the diatom Thalassiosira pseudonana.

Shrestha RP, Tesson B, Norden-Krichmar T, Federowicz S, Hildebrand M, Allen AE.

BMC Genomics. 2012 Sep 20;13:499. doi: 10.1186/1471-2164-13-499.

PMID:
22994549
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Localization of putative carbonic anhydrases in two marine diatoms, Phaeodactylum tricornutum and Thalassiosira pseudonana.

Tachibana M, Allen AE, Kikutani S, Endo Y, Bowler C, Matsuda Y.

Photosynth Res. 2011 Sep;109(1-3):205-21. doi: 10.1007/s11120-011-9634-4. Epub 2011 Mar 2.

PMID:
21365259
[PubMed - indexed for MEDLINE]
13.

Chitin in diatoms and its association with the cell wall.

Durkin CA, Mock T, Armbrust EV.

Eukaryot Cell. 2009 Jul;8(7):1038-50. doi: 10.1128/EC.00079-09. Epub 2009 May 8.

PMID:
19429777
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Ferritin is used for iron storage in bloom-forming marine pennate diatoms.

Marchetti A, Parker MS, Moccia LP, Lin EO, Arrieta AL, Ribalet F, Murphy ME, Maldonado MT, Armbrust EV.

Nature. 2009 Jan 22;457(7228):467-70. doi: 10.1038/nature07539. Epub 2008 Nov 26.

PMID:
19037243
[PubMed - indexed for MEDLINE]
15.

Phylogenetic aspects of the sulfate assimilation genes from Thalassiosira pseudonana.

Bromke MA, Hoefgen R, Hesse H.

Amino Acids. 2013 May;44(5):1253-65. doi: 10.1007/s00726-013-1462-8. Epub 2013 Jan 26. Review.

PMID:
23354278
[PubMed - indexed for MEDLINE]
16.

Diatom proteomics reveals unique acclimation strategies to mitigate Fe limitation.

Nunn BL, Faux JF, Hippmann AA, Maldonado MT, Harvey HR, Goodlett DR, Boyd PW, Strzepek RF.

PLoS One. 2013 Oct 16;8(10):e75653. doi: 10.1371/journal.pone.0075653. eCollection 2013.

PMID:
24146769
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Comparative metatranscriptomics identifies molecular bases for the physiological responses of phytoplankton to varying iron availability.

Marchetti A, Schruth DM, Durkin CA, Parker MS, Kodner RB, Berthiaume CT, Morales R, Allen AE, Armbrust EV.

Proc Natl Acad Sci U S A. 2012 Feb 7;109(6):E317-25. doi: 10.1073/pnas.1118408109. Epub 2012 Jan 18.

PMID:
22308424
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Comparative genomics of the pennate diatom Phaeodactylum tricornutum.

Montsant A, Jabbari K, Maheswari U, Bowler C.

Plant Physiol. 2005 Feb;137(2):500-13. Epub 2005 Jan 21.

PMID:
15665249
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Genome-wide transcriptome analyses of silicon metabolism in Phaeodactylum tricornutum reveal the multilevel regulation of silicic acid transporters.

Sapriel G, Quinet M, Heijde M, Jourdren L, Tanty V, Luo G, Le Crom S, Lopez PJ.

PLoS One. 2009 Oct 14;4(10):e7458. doi: 10.1371/journal.pone.0007458.

PMID:
19829693
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

The thylakoid membrane proteome of two marine diatoms outlines both diatom-specific and species-specific features of the photosynthetic machinery.

Grouneva I, Rokka A, Aro EM.

J Proteome Res. 2011 Dec 2;10(12):5338-53. doi: 10.1021/pr200600f. Epub 2011 Nov 9.

PMID:
22017178
[PubMed - indexed for MEDLINE]

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