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Items: 1 to 20 of 146

1.

Fidelity of capture-enrichment for mtDNA genome sequencing: influence of NUMTs.

Li M, Schroeder R, Ko A, Stoneking M.

Nucleic Acids Res. 2012 Oct;40(18):e137. doi: 10.1093/nar/gks499. Epub 2012 May 30.

2.

Mitochondrial pseudogenes in the nuclear genome of Aedes aegypti mosquitoes: implications for past and future population genetic studies.

Hlaing T, Tun-Lin W, Somboon P, Socheat D, Setha T, Min S, Chang MS, Walton C.

BMC Genet. 2009 Mar 6;10:11. doi: 10.1186/1471-2156-10-11.

3.

Specificity of mtDNA-directed PCR-influence of NUclear MTDNA insertion (NUMT) contamination in routine samples and techniques.

Goios A, Prieto L, Amorim A, Pereira L.

Int J Legal Med. 2008 Jul;122(4):341-5. Epub 2007 Sep 14.

PMID:
17874117
4.

Mitochondrial disease genetic diagnostics: optimized whole-exome analysis for all MitoCarta nuclear genes and the mitochondrial genome.

Falk MJ, Pierce EA, Consugar M, Xie MH, Guadalupe M, Hardy O, Rappaport EF, Wallace DC, LeProust E, Gai X.

Discov Med. 2012 Dec;14(79):389-99.

5.

The RHNumtS compilation: features and bioinformatics approaches to locate and quantify Human NumtS.

Lascaro D, Castellana S, Gasparre G, Romeo G, Saccone C, Attimonelli M.

BMC Genomics. 2008 Jun 3;9:267. doi: 10.1186/1471-2164-9-267.

6.

Characterization of mitochondrial DNA heteroplasmy using a parallel sequencing system.

Tang S, Huang T.

Biotechniques. 2010 Apr;48(4):287-96. doi: 10.2144/000113389.

7.

Selective enrichment and sequencing of whole mitochondrial genomes in the presence of nuclear encoded mitochondrial pseudogenes (numts).

Wolff JN, Shearman DC, Brooks RC, Ballard JW.

PLoS One. 2012;7(5):e37142. doi: 10.1371/journal.pone.0037142. Epub 2012 May 14.

8.

Preventing the pollution of mitochondrial datasets with nuclear mitochondrial paralogs (numts).

Calvignac S, Konecny L, Malard F, Douady CJ.

Mitochondrion. 2011 Mar;11(2):246-54. doi: 10.1016/j.mito.2010.10.004. Epub 2010 Nov 1.

PMID:
21047564
9.

Targeted multiplex next-generation sequencing: advances in techniques of mitochondrial and nuclear DNA sequencing for population genomics.

Hancock-Hanser BL, Frey A, Leslie MS, Dutton PH, Archer FI, Morin PA.

Mol Ecol Resour. 2013 Mar;13(2):254-68. doi: 10.1111/1755-0998.12059. Epub 2013 Jan 25.

PMID:
23351075
10.

Heteroplasmy and ancient translocation of mitochondrial DNA to the nucleus in the Chinese Horseshoe Bat (Rhinolophus sinicus) complex.

Mao X, Dong J, Hua P, He G, Zhang S, Rossiter SJ.

PLoS One. 2014 May 19;9(5):e98035. doi: 10.1371/journal.pone.0098035. eCollection 2014.

11.

Detecting heteroplasmy from high-throughput sequencing of complete human mitochondrial DNA genomes.

Li M, Schönberg A, Schaefer M, Schroeder R, Nasidze I, Stoneking M.

Am J Hum Genet. 2010 Aug 13;87(2):237-49. doi: 10.1016/j.ajhg.2010.07.014.

12.

Genome-wide mapping of nuclear mitochondrial DNA sequences links DNA replication origins to chromosomal double-strand break formation in Schizosaccharomyces pombe.

Lenglez S, Hermand D, Decottignies A.

Genome Res. 2010 Sep;20(9):1250-61. doi: 10.1101/gr.104513.109. Epub 2010 Aug 5.

13.

Promiscuous DNA in the nuclear genomes of hemiascomycetous yeasts.

Sacerdot C, Casaregola S, Lafontaine I, Tekaia F, Dujon B, Ozier-Kalogeropoulos O.

FEMS Yeast Res. 2008 Sep;8(6):846-57. doi: 10.1111/j.1567-1364.2008.00409.x. Epub 2008 Jul 30.

14.

Factors affecting the relative abundance of nuclear copies of mitochondrial DNA (numts) in hominoids.

Soto-Calderón ID, Lee EJ, Jensen-Seaman MI, Anthony NM.

J Mol Evol. 2012 Oct;75(3-4):102-11. doi: 10.1007/s00239-012-9519-y. Epub 2012 Oct 10.

15.

Molecular poltergeists: mitochondrial DNA copies (numts) in sequenced nuclear genomes.

Hazkani-Covo E, Zeller RM, Martin W.

PLoS Genet. 2010 Feb 12;6(2):e1000834. doi: 10.1371/journal.pgen.1000834.

16.

Complete sequences of mitochondria genomes of Aedes aegypti and Culex quinquefasciatus and comparative analysis of mitochondrial DNA fragments inserted in the nuclear genomes.

Behura SK, Lobo NF, Haas B, deBruyn B, Lovin DD, Shumway MF, Puiu D, Romero-Severson J, Nene V, Severson DW.

Insect Biochem Mol Biol. 2011 Oct;41(10):770-7. doi: 10.1016/j.ibmb.2011.05.006. Epub 2011 May 27.

17.
18.

Rampant nuclear insertion of mtDNA across diverse lineages within Orthoptera (Insecta).

Song H, Moulton MJ, Whiting MF.

PLoS One. 2014 Oct 21;9(10):e110508. doi: 10.1371/journal.pone.0110508. eCollection 2014.

19.

Mammalian NUMT insertion is non-random.

Tsuji J, Frith MC, Tomii K, Horton P.

Nucleic Acids Res. 2012 Oct;40(18):9073-88. doi: 10.1093/nar/gks424. Epub 2012 Jul 3.

20.

In silico discovery of a nearly complete mitochondrial genome Numt in the dog (Canis lupus familiaris) nuclear genome.

Verscheure S, Backeljau T, Desmyter S.

Genetica. 2015 Aug;143(4):453-8. doi: 10.1007/s10709-015-9844-3. Epub 2015 May 20.

PMID:
25991039
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