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1.

Molecular epidemiology of HIV-associated tuberculosis in Dar es Salaam, Tanzania: strain predominance, clustering, and polyclonal disease.

Adams LV, Kreiswirth BN, Arbeit RD, Soini H, Mtei L, Matee M, Bakari M, Lahey T, Wieland-Alter W, Shashkina E, Kurepina N, Driscoll JR, Pallangyo K, Horsburgh CR, von Reyn CF.

J Clin Microbiol. 2012 Aug;50(8):2645-50. doi: 10.1128/JCM.00624-12. Epub 2012 May 30.

2.

DNA fingerprinting and phenotyping of Mycobacterium tuberculosis isolates from human immunodeficiency virus (HIV)-seropositive and HIV-seronegative patients in Tanzania.

Yang ZH, Mtoni I, Chonde M, Mwasekaga M, Fuursted K, Askgård DS, Bennedsen J, de Haas PE, van Soolingen D, van Embden JD, et al.

J Clin Microbiol. 1995 May;33(5):1064-9.

3.

Impact of HIV infection on the recurrence of tuberculosis in South India.

Narayanan S, Swaminathan S, Supply P, Shanmugam S, Narendran G, Hari L, Ramachandran R, Locht C, Jawahar MS, Narayanan PR.

J Infect Dis. 2010 Mar;201(5):691-703. doi: 10.1086/650528.

4.

M. tuberculosis genotypic diversity and drug susceptibility pattern in HIV-infected and non-HIV-infected patients in northern Tanzania.

Kibiki GS, Mulder B, Dolmans WM, de Beer JL, Boeree M, Sam N, van Soolingen D, Sola C, van der Zanden AG.

BMC Microbiol. 2007 May 31;7:51.

5.

Tuberculosis in HIV voluntary counselling and testing centres in Dar es Salaam, Tanzania.

Munseri PJ, Bakari M, Pallangyo K, Sandstrom E.

Scand J Infect Dis. 2010 Oct;42(10):767-74. doi: 10.3109/00365548.2010.495725.

PMID:
20586671
6.

DNA restriction fragment length polymorphism analysis of Mycobacterium tuberculosis isolates from HIV-seropositive and HIV-seronegative patients in Kampala, Uganda.

Asiimwe BB, Joloba ML, Ghebremichael S, Koivula T, Kateete DP, Katabazi FA, Pennhag A, Petersson R, Kallenius G.

BMC Infect Dis. 2009 Feb 5;9:12. doi: 10.1186/1471-2334-9-12.

7.

Mixed tuberculosis infections in rural South Vietnam.

Huyen MN, Kremer K, Lan NT, Cobelens FG, Buu TN, Dung NH, Caws M, Tiemersma EW, van Soolingen D.

J Clin Microbiol. 2012 May;50(5):1586-92. doi: 10.1128/JCM.00434-12. Epub 2012 Feb 29.

8.

Determination of drug susceptibility and DNA fingerprint patterns of clinical isolates of Mycobacterium tuberculosis from Kampala, Uganda.

Joloba ML, Whalen CC, Cave DM, Eisenach KD, Johnson JL, Okwera A, Morrissey A, Bajaksouzian S, Feagin J, Mugerwa R, Ellner J, Jacobs MR.

East Afr Med J. 2000 Feb;77(2):111-5.

PMID:
10774085
9.

Population-based molecular epidemiological study of tuberculosis in Malatya, Turkey.

Durmaz R, Zozio T, Gunal S, Allix C, Fauville-Dufaux M, Rastogi N.

J Clin Microbiol. 2007 Dec;45(12):4027-35. Epub 2007 Oct 10.

10.

Mycobacterium tuberculosis transmission in a country with low tuberculosis incidence: role of immigration and HIV infection.

Fenner L, Gagneux S, Helbling P, Battegay M, Rieder HL, Pfyffer GE, Zwahlen M, Furrer H, Siegrist HH, Fehr J, Dolina M, Calmy A, Stucki D, Jaton K, Janssens JP, Stalder JM, Bodmer T, Ninet B, Böttger EC, Egger M; Swiss HIV Cohort Study Group; Molecular Epidemiology of Tuberculosis Study Group.

J Clin Microbiol. 2012 Feb;50(2):388-95. doi: 10.1128/JCM.05392-11. Epub 2011 Nov 23.

11.

Spoligotype-based comparative population structure analysis of multidrug-resistant and isoniazid-monoresistant Mycobacterium tuberculosis complex clinical isolates in Poland.

Jagielski T, Augustynowicz-Kopec E, Zozio T, Rastogi N, Zwolska Z.

J Clin Microbiol. 2010 Nov;48(11):3899-909. doi: 10.1128/JCM.00572-10. Epub 2010 Sep 1.

12.

Strain-specific differences in two large Mycobacterium tuberculosis genotype clusters in isolates collected from homeless patients in New York City from 2001 to 2004.

Macaraig M, Agerton T, Driver CR, Munsiff SS, Abdelwahab J, Park J, Kreiswirth B, Driscoll J, Zhao B.

J Clin Microbiol. 2006 Aug;44(8):2890-6.

13.

Mycobacterium tuberculosis spoligotypes in Monterrey, Mexico.

Molina-Torres CA, Moreno-Torres E, Ocampo-Candiani J, Rendon A, Blackwood K, Kremer K, Rastogi N, Welsh O, Vera-Cabrera L.

J Clin Microbiol. 2010 Feb;48(2):448-55. doi: 10.1128/JCM.01894-09. Epub 2009 Nov 25.

14.

Discordance between mycobacterial interspersed repetitive-unit-variable-number tandem-repeat typing and IS6110 restriction fragment length polymorphism genotyping for analysis of Mycobacterium tuberculosis Beijing strains in a setting of high incidence of tuberculosis.

Hanekom M, van der Spuy GD, Gey van Pittius NC, McEvoy CR, Hoek KG, Ndabambi SL, Jordaan AM, Victor TC, van Helden PD, Warren RM.

J Clin Microbiol. 2008 Oct;46(10):3338-45. doi: 10.1128/JCM.00770-08. Epub 2008 Aug 20.

15.

First insight into the population structure of Mycobacterium tuberculosis in Saudi Arabia.

Al-Hajoj SA, Zozio T, Al-Rabiah F, Mohammad V, Al-Nasser M, Sola C, Rastogi N.

J Clin Microbiol. 2007 Aug;45(8):2467-73. Epub 2007 May 16.

16.

High rates of clustering of strains causing tuberculosis in Harare, Zimbabwe: a molecular epidemiological study.

Easterbrook PJ, Gibson A, Murad S, Lamprecht D, Ives N, Ferguson A, Lowe O, Mason P, Ndudzo A, Taziwa A, Makombe R, Mbengeranwa L, Sola C, Rastogi N, Drobniewski F.

J Clin Microbiol. 2004 Oct;42(10):4536-44. Erratum in: J Clin Microbiol. 2004 Dec;42(12):5965. Rostogi, Nalim [corrected to Rastogi, Nalin].

17.
18.

Evidence for local transmission and reactivation of tuberculosis in the Toronto Somali community.

Achonu C, Jamieson F, Behr MA, Lillebaek T, Khan K, Gardam M.

Scand J Infect Dis. 2006;38(9):778-81.

PMID:
16938731
19.

Molecular epidemiology of Mycobacterium tuberculosis strains isolated from patients in a human immunodeficiency virus cohort in Switzerland.

Strässle A, Putnik J, Weber R, Fehr-Merhof A, Wüst J, Pfyffer GE.

J Clin Microbiol. 1997 Feb;35(2):374-8.

20.
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