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Results: 1 to 20 of 102

Similar articles for PubMed (Select 22527270)

1.

Use of comparative genomics to develop EST-SSRs for red drum (Sciaenops ocellatus).

Hollenbeck CM, Portnoy DS, Gold JR.

Mar Biotechnol (NY). 2012 Dec;14(6):672-80. doi: 10.1007/s10126-012-9449-0. Epub 2012 Apr 19.

PMID:
22527270
2.

Microsatellite isolation and marker development in carrot - genomic distribution, linkage mapping, genetic diversity analysis and marker transferability across Apiaceae.

Cavagnaro PF, Chung SM, Manin S, Yildiz M, Ali A, Alessandro MS, Iorizzo M, Senalik DA, Simon PW.

BMC Genomics. 2011 Aug 1;12:386. doi: 10.1186/1471-2164-12-386.

3.

Large-scale identification of polymorphic microsatellites using an in silico approach.

Tang J, Baldwin SJ, Jacobs JM, Linden CG, Voorrips RE, Leunissen JA, van Eck H, Vosman B.

BMC Bioinformatics. 2008 Sep 15;9:374. doi: 10.1186/1471-2105-9-374.

4.

A fast and cost-effective approach to develop and map EST-SSR markers: oak as a case study.

Durand J, Bodénès C, Chancerel E, Frigerio JM, Vendramin G, Sebastiani F, Buonamici A, Gailing O, Koelewijn HP, Villani F, Mattioni C, Cherubini M, Goicoechea PG, Herrán A, Ikaran Z, Cabané C, Ueno S, Alberto F, Dumoulin PY, Guichoux E, de Daruvar A, Kremer A, Plomion C.

BMC Genomics. 2010 Oct 15;11:570. doi: 10.1186/1471-2164-11-570.

5.

Transferability of cereal EST-SSR markers to ryegrass.

Sim SC, Yu JK, Jo YK, Sorrells ME, Jung G.

Genome. 2009 May;52(5):431-7. doi: 10.1139/g09-019.

PMID:
19448723
6.

An in silico mining for simple sequence repeats from expressed sequence tags of zebrafish, medaka, Fundulus, and Xiphophorus.

Ju Z, Wells MC, Martinez A, Hazlewood L, Walter RB.

In Silico Biol. 2005;5(5-6):439-63.

PMID:
16268789
7.

In silico mining and characterization of simple sequence repeats from gilthead sea bream (Sparus aurata) expressed sequence tags (EST-SSRs); PCR amplification, polymorphism evaluation and multiplexing and cross-species assays.

Vogiatzi E, Lagnel J, Pakaki V, Louro B, Canario AV, Reinhardt R, Kotoulas G, Magoulas A, Tsigenopoulos CS.

Mar Genomics. 2011 Jun;4(2):83-91. doi: 10.1016/j.margen.2011.01.003. Epub 2011 Feb 5.

PMID:
21620329
8.

Isolation and characterization of novel microsatellite markers for yellow perch (Perca flavescens).

Zhan A, Wang Y, Brown B, Wang HP.

Int J Mol Sci. 2009 Jan;10(1):18-27. doi: 10.3390/ijms10010018. Epub 2008 Dec 27.

9.

Exploiting rice-sorghum synteny for targeted development of EST-SSRs to enrich the sorghum genetic linkage map.

Ramu P, Kassahun B, Senthilvel S, Ashok Kumar C, Jayashree B, Folkertsma RT, Reddy LA, Kuruvinashetti MS, Haussmann BI, Hash CT.

Theor Appl Genet. 2009 Nov;119(7):1193-204. doi: 10.1007/s00122-009-1120-4. Epub 2009 Aug 8.

PMID:
19669123
10.
11.

Comparative mapping in the Fagaceae and beyond with EST-SSRs.

Bodénès C, Chancerel E, Gailing O, Vendramin GG, Bagnoli F, Durand J, Goicoechea PG, Soliani C, Villani F, Mattioni C, Koelewijn HP, Murat F, Salse J, Roussel G, Boury C, Alberto F, Kremer A, Plomion C.

BMC Plant Biol. 2012 Aug 29;12:153. doi: 10.1186/1471-2229-12-153.

12.

Exploiting the transcriptome of Euphrates Poplar, Populus euphratica (Salicaceae) to develop and characterize new EST-SSR markers and construct an EST-SSR database.

Du FK, Xu F, Qu H, Feng S, Tang J, Wu R.

PLoS One. 2013 Apr 11;8(4):e61337. doi: 10.1371/journal.pone.0061337. Print 2013.

13.

Utility of EST-derived SSR in cultivated peanut (Arachis hypogaea L.) and Arachis wild species.

Liang X, Chen X, Hong Y, Liu H, Zhou G, Li S, Guo B.

BMC Plant Biol. 2009 Mar 24;9:35. doi: 10.1186/1471-2229-9-35.

14.

Development of EST derived SSRs and SNPs as a genomic resource in Indian catfish, Clarias batrachus.

Mohindra V, Singh A, Barman AS, Tripathi R, Sood N, Lal KK.

Mol Biol Rep. 2012 May;39(5):5921-31. doi: 10.1007/s11033-011-1404-z. Epub 2011 Dec 30.

PMID:
22207175
15.

A microsatellite map of white clover.

Barrett B, Griffiths A, Schreiber M, Ellison N, Mercer C, Bouton J, Ong B, Forster J, Sawbridge T, Spangenberg G, Bryan G, Woodfield D.

Theor Appl Genet. 2004 Aug;109(3):596-608. Epub 2004 Apr 22.

PMID:
15103407
16.

Characteristics, development and mapping of Gossypium hirsutum derived EST-SSRs in allotetraploid cotton.

Han Z, Wang C, Song X, Guo W, Gou J, Li C, Chen X, Zhang T.

Theor Appl Genet. 2006 Feb;112(3):430-9. Epub 2005 Dec 9.

PMID:
16341684
17.

SSR mining in coffee tree EST databases: potential use of EST-SSRs as markers for the Coffea genus.

Poncet V, Rondeau M, Tranchant C, Cayrel A, Hamon S, de Kochko A, Hamon P.

Mol Genet Genomics. 2006 Nov;276(5):436-49. Epub 2006 Aug 19.

PMID:
16924545
18.

High transferability of bread wheat EST-derived SSRs to other cereals.

Zhang LY, Bernard M, Leroy P, Feuillet C, Sourdille P.

Theor Appl Genet. 2005 Aug;111(4):677-87. Epub 2005 Jul 21.

PMID:
16034582
19.

Genetic mapping of EST-derived microsatellites from the diploid Gossypium arboreum in allotetraploid cotton.

Han ZG, Guo WZ, Song XL, Zhang TZ.

Mol Genet Genomics. 2004 Oct;272(3):308-27. Epub 2004 Sep 11.

PMID:
15368122
20.

Exploitation of pepper EST-SSRs and an SSR-based linkage map.

Yi G, Lee JM, Lee S, Choi D, Kim BD.

Theor Appl Genet. 2006 Dec;114(1):113-30. Epub 2006 Oct 18.

PMID:
17047912
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