Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Results: 1 to 20 of 363

1.

Exploring the switchgrass transcriptome using second-generation sequencing technology.

Wang Y, Zeng X, Iyer NJ, Bryant DW, Mockler TC, Mahalingam R.

PLoS One. 2012;7(3):e34225. doi: 10.1371/journal.pone.0034225. Epub 2012 Mar 29.

PMID:
22479570
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Characterization of transcriptome dynamics during watermelon fruit development: sequencing, assembly, annotation and gene expression profiles.

Guo S, Liu J, Zheng Y, Huang M, Zhang H, Gong G, He H, Ren Y, Zhong S, Fei Z, Xu Y.

BMC Genomics. 2011 Sep 21;12:454. doi: 10.1186/1471-2164-12-454.

PMID:
21936920
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

SNP discovery with EST and NextGen sequencing in switchgrass (Panicum virgatum L.).

Ersoz ES, Wright MH, Pangilinan JL, Sheehan MJ, Tobias C, Casler MD, Buckler ES, Costich DE.

PLoS One. 2012;7(9):e44112. doi: 10.1371/journal.pone.0044112. Epub 2012 Sep 25.

PMID:
23049744
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

New genomic resources for switchgrass: a BAC library and comparative analysis of homoeologous genomic regions harboring bioenergy traits.

Saski CA, Li Z, Feltus FA, Luo H.

BMC Genomics. 2011 Jul 18;12:369. doi: 10.1186/1471-2164-12-369.

PMID:
21767393
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Transcriptome sequencing in an ecologically important tree species: assembly, annotation, and marker discovery.

Parchman TL, Geist KS, Grahnen JA, Benkman CW, Buerkle CA.

BMC Genomics. 2010 Mar 16;11:180. doi: 10.1186/1471-2164-11-180.

PMID:
20233449
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Transcriptome de novo assembly from next-generation sequencing and comparative analyses in the hexaploid salt marsh species Spartina maritima and Spartina alterniflora (Poaceae).

Ferreira de Carvalho J, Poulain J, Da Silva C, Wincker P, Michon-Coudouel S, Dheilly A, Naquin D, Boutte J, Salmon A, Ainouche M.

Heredity (Edinb). 2013 Feb;110(2):181-93. doi: 10.1038/hdy.2012.76. Epub 2012 Nov 14.

PMID:
23149455
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Transcriptome sequencing of lentil based on second-generation technology permits large-scale unigene assembly and SSR marker discovery.

Kaur S, Cogan NO, Pembleton LW, Shinozuka M, Savin KW, Materne M, Forster JW.

BMC Genomics. 2011 May 25;12:265. doi: 10.1186/1471-2164-12-265.

PMID:
21609489
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Generation and analysis of expressed sequence tags in the extreme large genomes Lilium and Tulipa.

Shahin A, van Kaauwen M, Esselink D, Bargsten JW, van Tuyl JM, Visser RG, Arens P.

BMC Genomics. 2012 Nov 20;13:640. doi: 10.1186/1471-2164-13-640.

PMID:
23167289
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

A second generation framework for the analysis of microsatellites in expressed sequence tags and the development of EST-SSR markers for a conifer, Cryptomeria japonica.

Ueno S, Moriguchi Y, Uchiyama K, Ujino-Ihara T, Futamura N, Sakurai T, Shinohara K, Tsumura Y.

BMC Genomics. 2012 Apr 16;13:136. doi: 10.1186/1471-2164-13-136.

PMID:
22507374
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Whole transcriptome analysis using next-generation sequencing of model species Setaria viridis to support C4 photosynthesis research.

Xu J, Li Y, Ma X, Ding J, Wang K, Wang S, Tian Y, Zhang H, Zhu XG.

Plant Mol Biol. 2013 Sep;83(1-2):77-87. doi: 10.1007/s11103-013-0025-4. Epub 2013 Mar 20.

PMID:
23512102
[PubMed - indexed for MEDLINE]
11.

Generation and analysis of blueberry transcriptome sequences from leaves, developing fruit, and flower buds from cold acclimation through deacclimation.

Rowland LJ, Alkharouf N, Darwish O, Ogden EL, Polashock JJ, Bassil NV, Main D.

BMC Plant Biol. 2012 Apr 2;12:46. doi: 10.1186/1471-2229-12-46.

PMID:
22471859
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Characterization of Oncidium 'Gower Ramsey' transcriptomes using 454 GS-FLX pyrosequencing and their application to the identification of genes associated with flowering time.

Chang YY, Chu YW, Chen CW, Leu WM, Hsu HF, Yang CH.

Plant Cell Physiol. 2011 Sep;52(9):1532-45. doi: 10.1093/pcp/pcr101. Epub 2011 Jul 23.

PMID:
21785129
[PubMed - indexed for MEDLINE]
13.

De novo assembly and characterization of bark transcriptome using Illumina sequencing and development of EST-SSR markers in rubber tree (Hevea brasiliensis Muell. Arg.).

Li D, Deng Z, Qin B, Liu X, Men Z.

BMC Genomics. 2012 May 18;13:192. doi: 10.1186/1471-2164-13-192.

PMID:
22607098
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Assessing the feasibility of GS FLX Pyrosequencing for sequencing the Atlantic salmon genome.

Quinn NL, Levenkova N, Chow W, Bouffard P, Boroevich KA, Knight JR, Jarvie TP, Lubieniecki KP, Desany BA, Koop BF, Harkins TT, Davidson WS.

BMC Genomics. 2008 Aug 28;9:404. doi: 10.1186/1471-2164-9-404.

PMID:
18755037
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Targeted mining of drought stress-responsive genes from EST resources in Cleistogenes songorica.

Zhang J, John UP, Wang Y, Li X, Gunawardana D, Polotnianka RM, Spangenberg GC, Nan Z.

J Plant Physiol. 2011 Oct 15;168(15):1844-51. doi: 10.1016/j.jplph.2011.04.005.

PMID:
21684035
[PubMed - indexed for MEDLINE]
16.

A genome-wide survey of switchgrass genome structure and organization.

Sharma MK, Sharma R, Cao P, Jenkins J, Bartley LE, Qualls M, Grimwood J, Schmutz J, Rokhsar D, Ronald PC.

PLoS One. 2012;7(4):e33892. doi: 10.1371/journal.pone.0033892. Epub 2012 Apr 12.

PMID:
22511929
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

De novo sequence assembly and characterization of Lycoris aurea transcriptome using GS FLX titanium platform of 454 pyrosequencing.

Wang R, Xu S, Jiang Y, Jiang J, Li X, Liang L, He J, Peng F, Xia B.

PLoS One. 2013 Apr 9;8(4):e60449. doi: 10.1371/journal.pone.0060449. Print 2013.

PMID:
23593220
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Generation, functional annotation and comparative analysis of black spruce (Picea mariana) ESTs: an important conifer genomic resource.

Mann IK, Wegrzyn JL, Rajora OP.

BMC Genomics. 2013 Oct 11;14:702. doi: 10.1186/1471-2164-14-702.

PMID:
24119028
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Transcriptome analysis in sheepgrass (Leymus chinensis): a dominant perennial grass of the Eurasian Steppe.

Chen S, Huang X, Yan X, Liang Y, Wang Y, Li X, Peng X, Ma X, Zhang L, Cai Y, Ma T, Cheng L, Qi D, Zheng H, Yang X, Li X, Liu G.

PLoS One. 2013 Jul 4;8(7):e67974. doi: 10.1371/journal.pone.0067974. Print 2013.

PMID:
23861841
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Development of an integrated transcript sequence database and a gene expression atlas for gene discovery and analysis in switchgrass (Panicum virgatum L.).

Zhang JY, Lee YC, Torres-Jerez I, Wang M, Yin Y, Chou WC, He J, Shen H, Srivastava AC, Pennacchio C, Lindquist E, Grimwood J, Schmutz J, Xu Y, Sharma M, Sharma R, Bartley LE, Ronald PC, Saha MC, Dixon RA, Tang Y, Udvardi MK.

Plant J. 2013 Apr;74(1):160-73. doi: 10.1111/tpj.12104. Epub 2013 Feb 18.

PMID:
23289674
[PubMed - indexed for MEDLINE]

Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

Write to the Help Desk