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Items: 1 to 20 of 143

1.

Genome-wide localization of replication factors.

Lubelsky Y, MacAlpine HK, MacAlpine DM.

Methods. 2012 Jun;57(2):187-95. doi: 10.1016/j.ymeth.2012.03.022. Epub 2012 Mar 24.

PMID:
22465279
2.

Mapping protein-DNA interactions using ChIP-sequencing.

Massie CE, Mills IG.

Methods Mol Biol. 2012;809:157-73. doi: 10.1007/978-1-61779-376-9_11.

PMID:
22113275
3.

Genome-wide epigenetic analysis of human pluripotent stem cells by ChIP and ChIP-Seq.

Hitchler MJ, Rice JC.

Methods Mol Biol. 2011;767:253-67. doi: 10.1007/978-1-61779-201-4_19.

PMID:
21822881
4.

Isolation of intracellular protein--DNA complexes using HaloCHIP, an antibody-free alternative to chromatin immunoprecipitation.

Daniels DL, Urh M.

Methods Mol Biol. 2013;977:111-24. doi: 10.1007/978-1-62703-284-1_9.

PMID:
23436357
5.

Chromatin composition is changed by poly(ADP-ribosyl)ation during chromatin immunoprecipitation.

Beneke S, Meyer K, Holtz A, Hüttner K, Bürkle A.

PLoS One. 2012;7(3):e32914. doi: 10.1371/journal.pone.0032914. Epub 2012 Mar 30.

6.

Chromatin immunoprecipitation using microarrays.

Durand-Dubief M, Ekwall K.

Methods Mol Biol. 2009;529:279-95. doi: 10.1007/978-1-59745-538-1_18.

PMID:
19381973
7.

ChIP-chip to analyze the binding of replication proteins to chromatin using oligonucleotide DNA microarrays.

Viggiani CJ, Aparicio JG, Aparicio OM.

Methods Mol Biol. 2009;521:255-78. doi: 10.1007/978-1-60327-815-7_14.

PMID:
19563111
8.

Computational analysis of protein-DNA interactions from ChIP-seq data.

Rougemont J, Naef F.

Methods Mol Biol. 2012;786:263-73. doi: 10.1007/978-1-61779-292-2_16.

PMID:
21938632
9.

Chromatin immunoprecipitation of replication factors moving with the replication fork.

Rapp JB, Ansbach AB, Noguchi C, Noguchi E.

Methods Mol Biol. 2009;521:191-202. doi: 10.1007/978-1-60327-815-7_10.

10.

[Finding targets of transcriptional regulators--chromatin immunoprecipitation assay (ChIP)].

Kus-Liśkiewicz M, Widłak W.

Postepy Biochem. 2011;57(4):418-24. Review. Polish.

PMID:
22568174
11.
12.

Analyzing transcription factor occupancy during embryo development using ChIP-seq.

Ghavi-Helm Y, Furlong EE.

Methods Mol Biol. 2012;786:229-45. doi: 10.1007/978-1-61779-292-2_14.

PMID:
21938630
13.

Mapping the genomic binding sites of the activated retinoid X receptor in murine bone marrow-derived macrophages using chromatin immunoprecipitation sequencing.

Daniel B, Balint BL, Nagy ZS, Nagy L.

Methods Mol Biol. 2014;1204:15-24. doi: 10.1007/978-1-4939-1346-6_2.

PMID:
25182757
14.

ChIP-seq and beyond: new and improved methodologies to detect and characterize protein-DNA interactions.

Furey TS.

Nat Rev Genet. 2012 Dec;13(12):840-52. doi: 10.1038/nrg3306. Epub 2012 Oct 23. Review.

15.

Chromatin immunoprecipitation analysis of Xenopus embryos.

Akkers RC, Jacobi UG, Veenstra GJ.

Methods Mol Biol. 2012;917:279-92. doi: 10.1007/978-1-61779-992-1_17.

PMID:
22956095
16.

Role for a Drosophila Myb-containing protein complex in site-specific DNA replication.

Beall EL, Manak JR, Zhou S, Bell M, Lipsick JS, Botchan MR.

Nature. 2002 Dec 19-26;420(6917):833-7.

PMID:
12490953
17.

Chromatin immunoprecipitation for determining the association of proteins with specific genomic sequences in vivo.

Aparicio O, Geisberg JV, Struhl K.

Curr Protoc Cell Biol. 2004 Sep;Chapter 17:Unit 17.7. doi: 10.1002/0471143030.cb1707s23. Review.

PMID:
18228445
18.

Next-generation sequencing applied to flower development: ChIP-Seq.

Graciet E, O'Maoiléidigh DS, Wellmer F.

Methods Mol Biol. 2014;1110:413-29. doi: 10.1007/978-1-4614-9408-9_24.

PMID:
24395273
19.

Analysis of in vivo transcription factor recruitment by chromatin immunoprecipitation of mouse embryonic kidney.

Heliot C, Cereghini S.

Methods Mol Biol. 2012;886:275-91. doi: 10.1007/978-1-61779-851-1_25.

PMID:
22639270
20.

ChIP-seq: using high-throughput sequencing to discover protein-DNA interactions.

Schmidt D, Wilson MD, Spyrou C, Brown GD, Hadfield J, Odom DT.

Methods. 2009 Jul;48(3):240-8. doi: 10.1016/j.ymeth.2009.03.001. Epub 2009 Mar 9.

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