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Results: 1 to 20 of 163

1.

Redox balance is key to explaining full vs. partial switching to low-yield metabolism.

van Hoek MJ, Merks RM.

BMC Syst Biol. 2012 Mar 24;6:22. doi: 10.1186/1752-0509-6-22.

PMID:
22443685
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Aerobic glucose metabolism of Saccharomyces kluyveri: growth, metabolite production, and quantification of metabolic fluxes.

Møller K, Christensen B, Förster J, Piskur J, Nielsen J, Olsson L.

Biotechnol Bioeng. 2002 Jan 20;77(2):186-93.

PMID:
11753925
[PubMed - indexed for MEDLINE]
3.

Batch culture characterization and metabolic flux analysis of succinate-producing Escherichia coli strains.

Sánchez AM, Bennett GN, San KY.

Metab Eng. 2006 May;8(3):209-26. Epub 2006 Jan 23.

PMID:
16434224
[PubMed - indexed for MEDLINE]
4.

Two different pathways for D-xylose metabolism and the effect of xylose concentration on the yield coefficient of L-lactate in mixed-acid fermentation by the lactic acid bacterium Lactococcus lactis IO-1.

Tanaka K, Komiyama A, Sonomoto K, Ishizaki A, Hall SJ, Stanbury PF.

Appl Microbiol Biotechnol. 2002 Oct;60(1-2):160-7. Epub 2002 Aug 17.

PMID:
12382058
[PubMed - indexed for MEDLINE]
5.

Generally applicable fed-batch culture concept based on the detection of metabolic state by on-line balancing.

Jobé AM, Herwig C, Surzyn M, Walker B, Marison I, von Stockar U.

Biotechnol Bioeng. 2003 Jun 20;82(6):627-39.

PMID:
12673762
[PubMed - indexed for MEDLINE]
6.

Metabolic analysis of the synthesis of high levels of intracellular human SOD in Saccharomyces cerevisiae rhSOD 2060 411 SGA122.

Gonzalez R, Andrews BA, Molitor J, Asenjo JA.

Biotechnol Bioeng. 2003 Apr 20;82(2):152-69.

PMID:
12584757
[PubMed - indexed for MEDLINE]
7.

In silico metabolic pathway analysis and design: succinic acid production by metabolically engineered Escherichia coli as an example.

Lee SY, Hong SH, Moon SY.

Genome Inform. 2002;13:214-23.

PMID:
14571390
[PubMed - indexed for MEDLINE]
8.

Engineering the metabolism of Escherichia coli W3110 for the conversion of sugar to redox-neutral and oxidized products: homoacetate production.

Causey TB, Zhou S, Shanmugam KT, Ingram LO.

Proc Natl Acad Sci U S A. 2003 Feb 4;100(3):825-32. Epub 2003 Jan 29.

PMID:
12556564
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

13C-metabolic flux ratio and novel carbon path analyses confirmed that Trichoderma reesei uses primarily the respirative pathway also on the preferred carbon source glucose.

Jouhten P, Pitkänen E, Pakula T, Saloheimo M, Penttilä M, Maaheimo H.

BMC Syst Biol. 2009 Oct 29;3:104. doi: 10.1186/1752-0509-3-104.

PMID:
19874611
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Dynamic flux balance modeling of S. cerevisiae and E. coli co-cultures for efficient consumption of glucose/xylose mixtures.

Hanly TJ, Urello M, Henson MA.

Appl Microbiol Biotechnol. 2012 Mar;93(6):2529-41. doi: 10.1007/s00253-011-3628-1. Epub 2011 Oct 18.

PMID:
22005741
[PubMed - indexed for MEDLINE]
11.

Increasing NADH oxidation reduces overflow metabolism in Saccharomyces cerevisiae.

Vemuri GN, Eiteman MA, McEwen JE, Olsson L, Nielsen J.

Proc Natl Acad Sci U S A. 2007 Feb 13;104(7):2402-7. Epub 2007 Feb 7.

PMID:
17287356
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Acetate utilization in Lactococcus lactis deficient in lactate dehydrogenase: a rescue pathway for maintaining redox balance.

Hols P, Ramos A, Hugenholtz J, Delcour J, de Vos WM, Santos H, Kleerebezem M.

J Bacteriol. 1999 Sep;181(17):5521-6.

PMID:
10464231
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Application of dynamic flux balance analysis to an industrial Escherichia coli fermentation.

Meadows AL, Karnik R, Lam H, Forestell S, Snedecor B.

Metab Eng. 2010 Mar;12(2):150-60. doi: 10.1016/j.ymben.2009.07.006. Epub 2009 Jul 29.

PMID:
19646545
[PubMed - indexed for MEDLINE]
14.

Novel pathway engineering design of the anaerobic central metabolic pathway in Escherichia coli to increase succinate yield and productivity.

Sánchez AM, Bennett GN, San KY.

Metab Eng. 2005 May;7(3):229-39.

PMID:
15885621
[PubMed - indexed for MEDLINE]
15.

Metabolic pathway analysis for rational design of L-methionine production by Escherichia coli and Corynebacterium glutamicum.

Krömer JO, Wittmann C, Schröder H, Heinzle E.

Metab Eng. 2006 Jul;8(4):353-69. Epub 2006 Apr 18.

PMID:
16621639
[PubMed - indexed for MEDLINE]
16.

Metabolic flux balance analysis and the in silico analysis of Escherichia coli K-12 gene deletions.

Edwards JS, Palsson BO.

BMC Bioinformatics. 2000;1:1. Epub 2000 Jul 27.

PMID:
11001586
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

A constraint-based model analysis of the metabolic consequences of increased NADPH oxidation in Saccharomyces cerevisiae.

Celton M, Goelzer A, Camarasa C, Fromion V, Dequin S.

Metab Eng. 2012 Jul;14(4):366-79. doi: 10.1016/j.ymben.2012.03.008. Epub 2012 Mar 26.

PMID:
22709677
[PubMed - indexed for MEDLINE]
18.

Glycolytic strategy as a tradeoff between energy yield and protein cost.

Flamholz A, Noor E, Bar-Even A, Liebermeister W, Milo R.

Proc Natl Acad Sci U S A. 2013 Jun 11;110(24):10039-44. doi: 10.1073/pnas.1215283110. Epub 2013 Apr 29.

PMID:
23630264
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Glucose metabolism at high density growth of E. coli B and E. coli K: differences in metabolic pathways are responsible for efficient glucose utilization in E. coli B as determined by microarrays and Northern blot analyses.

Phue JN, Noronha SB, Hattacharyya R, Wolfe AJ, Shiloach J.

Biotechnol Bioeng. 2005 Jun 30;90(7):805-20. Erratum in: Biotechnol Bioeng. 2005 Sep 5;91(5):649.

PMID:
15806547
[PubMed - indexed for MEDLINE]
20.

A systematic investigation of Escherichia coli central carbon metabolism in response to superoxide stress.

Rui B, Shen T, Zhou H, Liu J, Chen J, Pan X, Liu H, Wu J, Zheng H, Shi Y.

BMC Syst Biol. 2010 Sep 1;4:122. doi: 10.1186/1752-0509-4-122.

PMID:
20809933
[PubMed - indexed for MEDLINE]
Free PMC Article

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