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Similar articles for PubMed (Select 22443345)

1.

Comparative transcriptomics of three Poaceae species reveals patterns of gene expression evolution.

Davidson RM, Gowda M, Moghe G, Lin H, Vaillancourt B, Shiu SH, Jiang N, Robin Buell C.

Plant J. 2012 Aug;71(3):492-502. doi: 10.1111/j.1365-313X.2012.05005.x. Epub 2012 Jun 5.

PMID:
22443345
2.

Genome sequencing and analysis of the model grass Brachypodium distachyon.

International Brachypodium Initiative.

Nature. 2010 Feb 11;463(7282):763-8. doi: 10.1038/nature08747.

PMID:
20148030
3.

Sixty million years in evolution of soft grain trait in grasses: emergence of the softness locus in the common ancestor of Pooideae and Ehrhartoideae, after their divergence from Panicoideae.

Charles M, Tang H, Belcram H, Paterson A, Gornicki P, Chalhoub B.

Mol Biol Evol. 2009 Jul;26(7):1651-61. doi: 10.1093/molbev/msp076. Epub 2009 Apr 24.

4.

The perennial ryegrass GenomeZipper: targeted use of genome resources for comparative grass genomics.

Pfeifer M, Martis M, Asp T, Mayer KF, Lübberstedt T, Byrne S, Frei U, Studer B.

Plant Physiol. 2013 Feb;161(2):571-82. doi: 10.1104/pp.112.207282. Epub 2012 Nov 26.

5.

The family of DOF transcription factors in Brachypodium distachyon: phylogenetic comparison with rice and barley DOFs and expression profiling.

Hernando-Amado S, González-Calle V, Carbonero P, Barrero-Sicilia C.

BMC Plant Biol. 2012 Nov 5;12:202. doi: 10.1186/1471-2229-12-202.

6.

Gene space dynamics during the evolution of Aegilops tauschii, Brachypodium distachyon, Oryza sativa, and Sorghum bicolor genomes.

Massa AN, Wanjugi H, Deal KR, O'Brien K, You FM, Maiti R, Chan AP, Gu YQ, Luo MC, Anderson OD, Rabinowicz PD, Dvorak J, Devos KM.

Mol Biol Evol. 2011 Sep;28(9):2537-47. doi: 10.1093/molbev/msr080. Epub 2011 Apr 6.

7.

Structural characterization of Brachypodium genome and its syntenic relationship with rice and wheat.

Huo N, Vogel JP, Lazo GR, You FM, Ma Y, McMahon S, Dvorak J, Anderson OD, Luo MC, Gu YQ.

Plant Mol Biol. 2009 May;70(1-2):47-61. doi: 10.1007/s11103-009-9456-3. Epub 2009 Jan 29.

PMID:
19184460
8.

Micro-colinearity between rice, Brachypodium, and Triticum monococcum at the wheat domestication locus Q.

Faris JD, Zhang Z, Fellers JP, Gill BS.

Funct Integr Genomics. 2008 May;8(2):149-64. doi: 10.1007/s10142-008-0073-z. Epub 2008 Jan 22.

PMID:
18210171
9.

Genome-wide identification and analysis of MAPK and MAPKK gene families in Brachypodium distachyon.

Chen L, Hu W, Tan S, Wang M, Ma Z, Zhou S, Deng X, Zhang Y, Huang C, Yang G, He G.

PLoS One. 2012;7(10):e46744. doi: 10.1371/journal.pone.0046744. Epub 2012 Oct 17.

10.

Insights into the Musa genome: syntenic relationships to rice and between Musa species.

Lescot M, Piffanelli P, Ciampi AY, Ruiz M, Blanc G, Leebens-Mack J, da Silva FR, Santos CM, D'Hont A, Garsmeur O, Vilarinhos AD, Kanamori H, Matsumoto T, Ronning CM, Cheung F, Haas BJ, Althoff R, Arbogast T, Hine E, Pappas GJ Jr, Sasaki T, Souza MT Jr, Miller RN, Glaszmann JC, Town CD.

BMC Genomics. 2008 Jan 30;9:58. doi: 10.1186/1471-2164-9-58.

11.

Ancestral grass karyotype reconstruction unravels new mechanisms of genome shuffling as a source of plant evolution.

Murat F, Xu JH, Tannier E, Abrouk M, Guilhot N, Pont C, Messing J, Salse J.

Genome Res. 2010 Nov;20(11):1545-57. doi: 10.1101/gr.109744.110. Epub 2010 Sep 28.

12.

Comparison of orthologous loci from small grass genomes Brachypodium and rice: implications for wheat genomics and grass genome annotation.

Bossolini E, Wicker T, Knobel PA, Keller B.

Plant J. 2007 Feb;49(4):704-17. Epub 2007 Jan 18. Erratum in: Plant J. 2007 Jun;50(6):1129.

PMID:
17270010
13.

A BAC-based physical map of Brachypodium distachyon and its comparative analysis with rice and wheat.

Gu YQ, Ma Y, Huo N, Vogel JP, You FM, Lazo GR, Nelson WM, Soderlund C, Dvorak J, Anderson OD, Luo MC.

BMC Genomics. 2009 Oct 27;10:496. doi: 10.1186/1471-2164-10-496.

14.

Molecular, phylogenetic and comparative genomic analysis of the cytokinin oxidase/dehydrogenase gene family in the Poaceae.

Mameaux S, Cockram J, Thiel T, Steuernagel B, Stein N, Taudien S, Jack P, Werner P, Gray JC, Greenland AJ, Powell W.

Plant Biotechnol J. 2012 Jan;10(1):67-82. doi: 10.1111/j.1467-7652.2011.00645.x. Epub 2011 Aug 15.

PMID:
21838715
15.

Discovery of MicroRNA169 gene copies in genomes of flowering plants through positional information.

Calviño M, Messing J.

Genome Biol Evol. 2013;5(2):402-17. doi: 10.1093/gbe/evt015.

16.

Frequent gene movement and pseudogene evolution is common to the large and complex genomes of wheat, barley, and their relatives.

Wicker T, Mayer KF, Gundlach H, Martis M, Steuernagel B, Scholz U, Simková H, Kubaláková M, Choulet F, Taudien S, Platzer M, Feuillet C, Fahima T, Budak H, Dolezel J, Keller B, Stein N.

Plant Cell. 2011 May;23(5):1706-18. doi: 10.1105/tpc.111.086629. Epub 2011 May 27.

17.

WOX gene phylogeny in Poaceae: a comparative approach addressing leaf and embryo development.

Nardmann J, Zimmermann R, Durantini D, Kranz E, Werr W.

Mol Biol Evol. 2007 Nov;24(11):2474-84. Epub 2007 Sep 3.

18.

Exploring the genomes: from Arabidopsis to crops.

Spannagl M, Mayer K, Durner J, Haberer G, Fröhlich A.

J Plant Physiol. 2011 Jan 1;168(1):3-8. doi: 10.1016/j.jplph.2010.07.008. Review.

PMID:
20817312
19.

The spatial expression patterns of DROOPING LEAF orthologs suggest a conserved function in grasses.

Ishikawa M, Ohmori Y, Tanaka W, Hirabayashi C, Murai K, Ogihara Y, Yamaguchi T, Hirano HY.

Genes Genet Syst. 2009 Apr;84(2):137-46.

20.

Amplification of prolamin storage protein genes in different subfamilies of the Poaceae.

Xu JH, Messing J.

Theor Appl Genet. 2009 Nov;119(8):1397-412. doi: 10.1007/s00122-009-1143-x. Epub 2009 Aug 29.

PMID:
19727653
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