Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Results: 1 to 20 of 88

1.

FCSTrans: an open source software system for FCS file conversion and data transformation.

Qian Y, Liu Y, Campbell J, Thomson E, Kong YM, Scheuermann RH.

Cytometry A. 2012 May;81(5):353-6. doi: 10.1002/cyto.a.22037. Epub 2012 Mar 19. No abstract available.

PMID:
22431383
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Data File Standard for Flow Cytometry, version FCS 3.1.

Spidlen J, Moore W, Parks D, Goldberg M, Bray C, Bierre P, Gorombey P, Hyun B, Hubbard M, Lange S, Lefebvre R, Leif R, Novo D, Ostruszka L, Treister A, Wood J, Murphy RF, Roederer M, Sudar D, Zigon R, Brinkman RR.

Cytometry A. 2010 Jan;77(1):97-100. doi: 10.1002/cyto.a.20825.

PMID:
19937951
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

A perspective for biomedical data integration: design of databases for flow cytometry.

Drakos J, Karakantza M, Zoumbos NC, Lakoumentas J, Nikiforidis GC, Sakellaropoulos GC.

BMC Bioinformatics. 2008 Feb 14;9:99. doi: 10.1186/1471-2105-9-99.

PMID:
18275602
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Preparing a Minimum Information about a Flow Cytometry Experiment (MIFlowCyt) compliant manuscript using the International Society for Advancement of Cytometry (ISAC) FCS file repository (FlowRepository.org).

Spidlen J, Breuer K, Brinkman R.

Curr Protoc Cytom. 2012 Jul;Chapter 10:Unit 10.18. doi: 10.1002/0471142956.cy1018s61.

PMID:
22752950
[PubMed - indexed for MEDLINE]
5.

Gating-ML: XML-based gating descriptions in flow cytometry.

Spidlen J, Leif RC, Moore W, Roederer M; International Society for the Advancement of Cytometry Data Standards Task Force, Brinkman RR.

Cytometry A. 2008 Dec;73A(12):1151-7. doi: 10.1002/cyto.a.20637.

PMID:
18773465
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

FCS 3.1 Implementation guidance.

Bray C, Spidlen J, Brinkman RR.

Cytometry A. 2012 Jun;81(6):523-6. doi: 10.1002/cyto.a.22018. Epub 2012 Jan 25.

PMID:
22278913
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Data management.

Parks DR.

Curr Protoc Cytom. 2001 May;Chapter 10:Unit 10.1. doi: 10.1002/0471142956.cy1001s00.

PMID:
18770673
[PubMed - indexed for MEDLINE]
8.

CytometryML, an XML format based on DICOM and FCS for analytical cytology data.

Leif RC, Leif SB, Leif SH.

Cytometry A. 2003 Jul;54(1):56-65.

PMID:
12820121
[PubMed - indexed for MEDLINE]
Free Article
9.

Data file standard for flow cytometry, FCS 3.0.

Seamer L.

Curr Protoc Cytom. 2001 May;Chapter 10:Unit 10.2. doi: 10.1002/0471142956.cy1002s00.

PMID:
18770676
[PubMed - indexed for MEDLINE]
10.

Time as a flow cytometric parameter.

Seamer L, Sklar LA.

Methods Cell Biol. 2001;63:169-83. No abstract available.

PMID:
11060841
[PubMed - indexed for MEDLINE]
11.

MARVIN: a medical research application framework based on open source software.

Rudolph T, Puls M, Anderegg C, Ebert L, Broehan M, Rudin A, Kowal J.

Comput Methods Programs Biomed. 2008 Aug;91(2):165-74. doi: 10.1016/j.cmpb.2008.04.007. Epub 2008 Jun 9.

PMID:
18541330
[PubMed - indexed for MEDLINE]
12.

Dial-in flow cytometry data analysis.

Battye FL.

Curr Protoc Cytom. 2002 Feb;Chapter 10:Unit 10.12. doi: 10.1002/0471142956.cy1012s19.

PMID:
18770764
[PubMed - indexed for MEDLINE]
13.

Java Treeview--extensible visualization of microarray data.

Saldanha AJ.

Bioinformatics. 2004 Nov 22;20(17):3246-8. Epub 2004 Jun 4.

PMID:
15180930
[PubMed - indexed for MEDLINE]
Free Article
14.

TM4: a free, open-source system for microarray data management and analysis.

Saeed AI, Sharov V, White J, Li J, Liang W, Bhagabati N, Braisted J, Klapa M, Currier T, Thiagarajan M, Sturn A, Snuffin M, Rezantsev A, Popov D, Ryltsov A, Kostukovich E, Borisovsky I, Liu Z, Vinsavich A, Trush V, Quackenbush J.

Biotechniques. 2003 Feb;34(2):374-8. No abstract available.

PMID:
12613259
[PubMed - indexed for MEDLINE]
15.

PASSIM--an open source software system for managing information in biomedical studies.

Viksna J, Celms E, Opmanis M, Podnieks K, Rucevskis P, Zarins A, Barrett A, Neogi SG, Krestyaninova M, McCarthy MI, Brazma A, Sarkans U.

BMC Bioinformatics. 2007 Feb 9;8:52.

PMID:
17291344
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

A System for Information Management in BioMedical Studies--SIMBioMS.

Krestyaninova M, Zarins A, Viksna J, Kurbatova N, Rucevskis P, Neogi SG, Gostev M, Perheentupa T, Knuuttila J, Barrett A, Lappalainen I, Rung J, Podnieks K, Sarkans U, McCarthy MI, Brazma A.

Bioinformatics. 2009 Oct 15;25(20):2768-9. doi: 10.1093/bioinformatics/btp420. Epub 2009 Jul 24.

PMID:
19633095
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

STORM towards protein function: systematic tailored ORF-data retrieval and management.

Lavigne R, Sun WD, Volckaert G.

Appl Bioinformatics. 2003;2(3):177-9.

PMID:
15130805
[PubMed - indexed for MEDLINE]
18.

Storage and retrieval of microarray data and open source microarray database software.

Sherlock G, Ball CA.

Mol Biotechnol. 2005 Jul;30(3):239-51. Review.

PMID:
15988049
[PubMed - indexed for MEDLINE]
19.

PeakML/mzMatch: a file format, Java library, R library, and tool-chain for mass spectrometry data analysis.

Scheltema RA, Jankevics A, Jansen RC, Swertz MA, Breitling R.

Anal Chem. 2011 Apr 1;83(7):2786-93. doi: 10.1021/ac2000994. Epub 2011 Mar 14.

PMID:
21401061
[PubMed - indexed for MEDLINE]
20.

Fast probabilistic file fingerprinting for big data.

Tretyakov K, Laur S, Smant G, Vilo J, Prins P.

BMC Genomics. 2013;14 Suppl 2:S8. doi: 10.1186/1471-2164-14-S2-S8. Epub 2013 Feb 15.

PMID:
23445565
[PubMed - indexed for MEDLINE]
Free PMC Article

Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

Write to the Help Desk