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Results: 1 to 20 of 149

1.

Integration of the Draft Sequence and Physical Map as a Framework for Genomic Research in Soybean (Glycine max (L.) Merr.) and Wild Soybean (Glycine soja Sieb. and Zucc.).

Ha J, Abernathy B, Nelson W, Grant D, Wu X, Nguyen HT, Stacey G, Yu Y, Wing RA, Shoemaker RC, Jackson SA.

G3 (Bethesda). 2012 Mar;2(3):321-9. doi: 10.1534/g3.111.001834. Epub 2012 Mar 1.

PMID:
22413085
[PubMed]
Free PMC Article
2.
3.

Whole-genome sequencing and intensive analysis of the undomesticated soybean (Glycine soja Sieb. and Zucc.) genome.

Kim MY, Lee S, Van K, Kim TH, Jeong SC, Choi IY, Kim DS, Lee YS, Park D, Ma J, Kim WY, Kim BC, Park S, Lee KA, Kim DH, Kim KH, Shin JH, Jang YE, Kim KD, Liu WX, Chaisan T, Kang YJ, Lee YH, Kim KH, Moon JK, Schmutz J, Jackson SA, Bhak J, Lee SH.

Proc Natl Acad Sci U S A. 2010 Dec 21;107(51):22032-7. doi: 10.1073/pnas.1009526107. Epub 2010 Dec 3. Review.

PMID:
21131573
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

The Soybean Genome Database (SoyGD): a browser for display of duplicated, polyploid, regions and sequence tagged sites on the integrated physical and genetic maps of Glycine max.

Shultz JL, Kurunam D, Shopinski K, Iqbal MJ, Kazi S, Zobrist K, Bashir R, Yaegashi S, Lavu N, Afzal AJ, Yesudas CR, Kassem MA, Wu C, Zhang HB, Town CD, Meksem K, Lightfoot DA.

Nucleic Acids Res. 2006 Jan 1;34(Database issue):D758-65.

PMID:
16381975
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

A BAC-based physical map of the Hessian fly genome anchored to polytene chromosomes.

Aggarwal R, Benatti TR, Gill N, Zhao C, Chen MS, Fellers JP, Schemerhorn BJ, Stuart JJ.

BMC Genomics. 2009 Jul 2;10:293. doi: 10.1186/1471-2164-10-293.

PMID:
19573234
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Generation of a BAC-based physical map of the melon genome.

González VM, Garcia-Mas J, Arús P, Puigdomènech P.

BMC Genomics. 2010 May 28;11:339. doi: 10.1186/1471-2164-11-339.

PMID:
20509895
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

A BAC-based physical map of Brachypodium distachyon and its comparative analysis with rice and wheat.

Gu YQ, Ma Y, Huo N, Vogel JP, You FM, Lazo GR, Nelson WM, Soderlund C, Dvorak J, Anderson OD, Luo MC.

BMC Genomics. 2009 Oct 27;10:496. doi: 10.1186/1471-2164-10-496.

PMID:
19860896
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Re-annotation of the physical map of Glycine max for polyploid-like regions by BAC end sequence driven whole genome shotgun read assembly.

Saini N, Shultz J, Lightfoot DA.

BMC Genomics. 2008 Jul 7;9:323. doi: 10.1186/1471-2164-9-323.

PMID:
18606011
[PubMed - indexed for MEDLINE]
Free PMC Article
9.
10.

Genetic marker anchoring by six-dimensional pools for development of a soybean physical map.

Wu X, Zhong G, Findley SD, Cregan P, Stacey G, Nguyen HT.

BMC Genomics. 2008 Jan 22;9:28. doi: 10.1186/1471-2164-9-28.

PMID:
18211698
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Genomic tools development for Aquilegia: construction of a BAC-based physical map.

Fang GC, Blackmon BP, Henry DC, Staton ME, Saski CA, Hodges SA, Tomkins JP, Luo H.

BMC Genomics. 2010 Nov 8;11:621. doi: 10.1186/1471-2164-11-621.

PMID:
21059242
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

A physical map of the highly heterozygous Populus genome: integration with the genome sequence and genetic map and analysis of haplotype variation.

Kelleher CT, Chiu R, Shin H, Bosdet IE, Krzywinski MI, Fjell CD, Wilkin J, Yin T, DiFazio SP, Ali J, Asano JK, Chan S, Cloutier A, Girn N, Leach S, Lee D, Mathewson CA, Olson T, O'connor K, Prabhu AL, Smailus DE, Stott JM, Tsai M, Wye NH, Yang GS, Zhuang J, Holt RA, Putnam NH, Vrebalov J, Giovannoni JJ, Grimwood J, Schmutz J, Rokhsar D, Jones SJ, Marra MA, Tuskan GA, Bohlmann J, Ellis BE, Ritland K, Douglas CJ, Schein JE.

Plant J. 2007 Jun;50(6):1063-78. Epub 2007 May 3.

PMID:
17488239
[PubMed - indexed for MEDLINE]
13.

Feasibility of physical map construction from fingerprinted bacterial artificial chromosome libraries of polyploid plant species.

Luo MC, Ma Y, You FM, Anderson OD, Kopecký D, Simková H, Safár J, Dolezel J, Gill B, McGuire PE, Dvorak J.

BMC Genomics. 2010 Feb 19;11:122. doi: 10.1186/1471-2164-11-122.

PMID:
20170511
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Integrating sequence with FPC fingerprint maps.

Nelson W, Soderlund C.

Nucleic Acids Res. 2009 Apr;37(5):e36. doi: 10.1093/nar/gkp034. Epub 2009 Jan 30.

PMID:
19181701
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Integrated physical, genetic and genome map of chickpea (Cicer arietinum L.).

Varshney RK, Mir RR, Bhatia S, Thudi M, Hu Y, Azam S, Zhang Y, Jaganathan D, You FM, Gao J, Riera-Lizarazu O, Luo MC.

Funct Integr Genomics. 2014 Mar;14(1):59-73. doi: 10.1007/s10142-014-0363-6. Epub 2014 Mar 8.

PMID:
24610029
[PubMed - in process]
16.

A BAC- and BIBAC-based physical map of the soybean genome.

Wu C, Sun S, Nimmakayala P, Santos FA, Meksem K, Springman R, Ding K, Lightfoot DA, Zhang HB.

Genome Res. 2004 Feb;14(2):319-26. Epub 2004 Jan 12.

PMID:
14718376
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Integrated and sequence-ordered BAC- and YAC-based physical maps for the rat genome.

Krzywinski M, Wallis J, Gösele C, Bosdet I, Chiu R, Graves T, Hummel O, Layman D, Mathewson C, Wye N, Zhu B, Albracht D, Asano J, Barber S, Brown-John M, Chan S, Chand S, Cloutier A, Davito J, Fjell C, Gaige T, Ganten D, Girn N, Guggenheimer K, Himmelbauer H, Kreitler T, Leach S, Lee D, Lehrach H, Mayo M, Mead K, Olson T, Pandoh P, Prabhu AL, Shin H, Tänzer S, Thompson J, Tsai M, Walker J, Yang G, Sekhon M, Hillier L, Zimdahl H, Marziali A, Osoegawa K, Zhao S, Siddiqui A, de Jong PJ, Warren W, Mardis E, McPherson JD, Wilson R, Hübner N, Jones S, Marra M, Schein J.

Genome Res. 2004 Apr;14(4):766-79.

PMID:
15060021
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

The first generation of a BAC-based physical map of Brassica rapa.

Mun JH, Kwon SJ, Yang TJ, Kim HS, Choi BS, Baek S, Kim JS, Jin M, Kim JA, Lim MH, Lee SI, Kim HI, Kim H, Lim YP, Park BS.

BMC Genomics. 2008 Jun 12;9:280. doi: 10.1186/1471-2164-9-280.

PMID:
18549474
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Physical mapping and BAC-end sequence analysis provide initial insights into the flax (Linum usitatissimum L.) genome.

Ragupathy R, Rathinavelu R, Cloutier S.

BMC Genomics. 2011 May 9;12:217. doi: 10.1186/1471-2164-12-217.

PMID:
21554714
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

A first generation BAC-based physical map of the rainbow trout genome.

Palti Y, Luo MC, Hu Y, Genet C, You FM, Vallejo RL, Thorgaard GH, Wheeler PA, Rexroad CE 3rd.

BMC Genomics. 2009 Oct 8;10:462. doi: 10.1186/1471-2164-10-462.

PMID:
19814815
[PubMed - indexed for MEDLINE]
Free PMC Article

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