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Results: 1 to 20 of 79

1.

Genomics data resources: frameworks and standards.

Wilkinson MD.

Methods Mol Biol. 2012;856:489-511. doi: 10.1007/978-1-61779-585-5_20.

PMID:
22399472
[PubMed - indexed for MEDLINE]
2.

Moby and Moby 2: creatures of the deep (web).

Vandervalk BP, McCarthy EL, Wilkinson MD.

Brief Bioinform. 2009 Mar;10(2):114-28. doi: 10.1093/bib/bbn051. Epub 2009 Jan 16.

PMID:
19151099
[PubMed - indexed for MEDLINE]
Free Article
3.

Knowledge networks in the age of the Semantic Web.

Neumann E, Prusak L.

Brief Bioinform. 2007 May;8(3):141-9. Epub 2007 May 14.

PMID:
17502336
[PubMed - indexed for MEDLINE]
Free Article
4.

From XML to RDF: how semantic web technologies will change the design of 'omic' standards.

Wang X, Gorlitsky R, Almeida JS.

Nat Biotechnol. 2005 Sep;23(9):1099-103.

PMID:
16151403
[PubMed - indexed for MEDLINE]
5.

The BiSciCol Triplifier: bringing biodiversity data to the Semantic Web.

Stucky BJ, Deck J, Conlin T, Ziemba L, Cellinese N, Guralnick R.

BMC Bioinformatics. 2014 Jul 29;15:257. doi: 10.1186/1471-2105-15-257.

PMID:
25073721
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

EGenBio: a data management system for evolutionary genomics and biodiversity.

Nahum LA, Reynolds MT, Wang ZO, Faith JJ, Jonna R, Jiang ZJ, Meyer TJ, Pollock DD.

BMC Bioinformatics. 2006 Sep 6;7 Suppl 2:S7.

PMID:
17118150
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Internet and information technology use in treatment of diabetes.

Kaufman N.

Int J Clin Pract Suppl. 2010 Feb;(166):41-6. doi: 10.1111/j.1742-1241.2009.02277.x. Review.

PMID:
20377663
[PubMed - indexed for MEDLINE]
8.

From information to understanding: the role of model organism databases in comparative and functional genomics.

Bult CJ.

Anim Genet. 2006 Aug;37 Suppl 1:28-40.

PMID:
16887000
[PubMed - indexed for MEDLINE]
9.

SOMWeb: a semantic web-based system for supporting collaboration of distributed medical communities of practice.

Falkman G, Gustafsson M, Jontell M, Torgersson O.

J Med Internet Res. 2008 Aug 26;10(3):e25. doi: 10.2196/jmir.1059.

PMID:
18725355
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Risk management frameworks for human health and environmental risks.

Jardine C, Hrudey S, Shortreed J, Craig L, Krewski D, Furgal C, McColl S.

J Toxicol Environ Health B Crit Rev. 2003 Nov-Dec;6(6):569-720. Review.

PMID:
14698953
[PubMed - indexed for MEDLINE]
11.

PLAN: a web platform for automating high-throughput BLAST searches and for managing and mining results.

He J, Dai X, Zhao X.

BMC Bioinformatics. 2007 Feb 9;8:53.

PMID:
17291345
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Translating standards into practice - one Semantic Web API for Gene Expression.

Deus HF, Prud'hommeaux E, Miller M, Zhao J, Malone J, Adamusiak T, McCusker J, Das S, Rocca Serra P, Fox R, Marshall MS.

J Biomed Inform. 2012 Aug;45(4):782-94. doi: 10.1016/j.jbi.2012.03.002. Epub 2012 Mar 24.

PMID:
22449719
[PubMed - indexed for MEDLINE]
Free Article
13.

Building biomedical web communities using a semantically aware content management system.

Das S, Girard L, Green T, Weitzman L, Lewis-Bowen A, Clark T.

Brief Bioinform. 2009 Mar;10(2):129-38. doi: 10.1093/bib/bbn052. Epub 2008 Dec 6.

PMID:
19060302
[PubMed - indexed for MEDLINE]
Free Article
14.

The Princeton Protein Orthology Database (P-POD): a comparative genomics analysis tool for biologists.

Heinicke S, Livstone MS, Lu C, Oughtred R, Kang F, Angiuoli SV, White O, Botstein D, Dolinski K.

PLoS One. 2007 Aug 22;2(8):e766.

PMID:
17712414
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Applying Semantic Web technologies to improve the retrieval, credibility and use of health-related web resources.

Mayer MA, Karampiperis P, Kukurikos A, Karkaletsis V, Stamatakis K, Villarroel D, Leis A.

Health Informatics J. 2011 Jun;17(2):95-115. doi: 10.1177/1460458211405004.

PMID:
21712354
[PubMed - indexed for MEDLINE]
16.

AlzPharm: integration of neurodegeneration data using RDF.

Lam HY, Marenco L, Clark T, Gao Y, Kinoshita J, Shepherd G, Miller P, Wu E, Wong GT, Liu N, Crasto C, Morse T, Stephens S, Cheung KH.

BMC Bioinformatics. 2007 May 9;8 Suppl 3:S4.

PMID:
17493287
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Gene ontology application to genomic functional annotation, statistical analysis and knowledge mining.

Martucci D, Masseroli M, Pinciroli F.

Stud Health Technol Inform. 2004;102:108-31.

PMID:
15853267
[PubMed - indexed for MEDLINE]
18.

StellaBase: the Nematostella vectensis Genomics Database.

Sullivan JC, Ryan JF, Watson JA, Webb J, Mullikin JC, Rokhsar D, Finnerty JR.

Nucleic Acids Res. 2006 Jan 1;34(Database issue):D495-9.

PMID:
16381919
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

The protein kinase resource and other bioinformation resources.

Smith CM.

Prog Biophys Mol Biol. 1999;71(3-4):525-33.

PMID:
10354712
[PubMed - indexed for MEDLINE]
20.

The Semantic Automated Discovery and Integration (SADI) Web service Design-Pattern, API and Reference Implementation.

Wilkinson MD, Vandervalk B, McCarthy L.

J Biomed Semantics. 2011 Oct 24;2(1):8. doi: 10.1186/2041-1480-2-8.

PMID:
22024447
[PubMed]
Free PMC Article

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