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Results: 1 to 20 of 113

Related Citations for PubMed (Select 22364353)

1.

Metatranscriptomics of the marine sponge Geodia barretti: tackling phylogeny and function of its microbial community.

Radax R, Rattei T, Lanzen A, Bayer C, Rapp HT, Urich T, Schleper C.

Environ Microbiol. 2012 May;14(5):1308-24. doi: 10.1111/j.1462-2920.2012.02714.x. Epub 2012 Feb 24.

PMID:
22364353
2.

Complex nitrogen cycling in the sponge Geodia barretti.

Hoffmann F, Radax R, Woebken D, Holtappels M, Lavik G, Rapp HT, Schläppy ML, Schleper C, Kuypers MM.

Environ Microbiol. 2009 Sep;11(9):2228-43. doi: 10.1111/j.1462-2920.2009.01944.x. Epub 2009 May 18.

PMID:
19453700
3.

Microbial metatranscriptomics in a permanent marine oxygen minimum zone.

Stewart FJ, Ulloa O, DeLong EF.

Environ Microbiol. 2012 Jan;14(1):23-40. doi: 10.1111/j.1462-2920.2010.02400.x. Epub 2011 Jan 7.

PMID:
21210935
4.

Monitoring microbial community composition by fluorescence in situ hybridization during cultivation of the marine cold-water sponge Geodia barretti.

Hoffmann F, Rapp HT, Reitner J.

Mar Biotechnol (NY). 2006 Jul-Aug;8(4):373-9. Epub 2006 Jun 12.

PMID:
16758369
5.

Profiling of the metabolically active community from a production-scale biogas plant by means of high-throughput metatranscriptome sequencing.

Zakrzewski M, Goesmann A, Jaenicke S, Jünemann S, Eikmeyer F, Szczepanowski R, Al-Soud WA, Sørensen S, Pühler A, Schlüter A.

J Biotechnol. 2012 Apr 30;158(4):248-58. doi: 10.1016/j.jbiotec.2012.01.020. Epub 2012 Feb 8.

PMID:
22342600
6.

Phylogenetic diversity and metabolic potential revealed in a glacier ice metagenome.

Simon C, Wiezer A, Strittmatter AW, Daniel R.

Appl Environ Microbiol. 2009 Dec;75(23):7519-26. doi: 10.1128/AEM.00946-09. Epub 2009 Oct 2.

7.

Community transcriptomic assembly reveals microbes that contribute to deep-sea carbon and nitrogen cycling.

Baker BJ, Sheik CS, Taylor CA, Jain S, Bhasi A, Cavalcoli JD, Dick GJ.

ISME J. 2013 Oct;7(10):1962-73. doi: 10.1038/ismej.2013.85. Epub 2013 May 23. Erratum in: ISME J. 2013 Oct;7(10):2060.

8.

Microbial community composition of anoxic marine sediments in the Bay of Cádiz (Spain).

Köchling T, Lara-Martín P, González-Mazo E, Amils R, Sanz JL.

Int Microbiol. 2011 Sep;14(3):143-54.

PMID:
22101412
9.

Ammonia-oxidizing archaea as main drivers of nitrification in cold-water sponges.

Radax R, Hoffmann F, Rapp HT, Leininger S, Schleper C.

Environ Microbiol. 2012 Apr;14(4):909-23. doi: 10.1111/j.1462-2920.2011.02661.x. Epub 2011 Dec 19.

PMID:
22176665
10.

Quantification of bacterial and archaeal symbionts in high and low microbial abundance sponges using real-time PCR.

Bayer K, Kamke J, Hentschel U.

FEMS Microbiol Ecol. 2014 Sep;89(3):679-90. doi: 10.1111/1574-6941.12369. Epub 2014 Jul 9.

PMID:
24942664
11.

Ribosomal tag pyrosequencing of DNA and RNA from benthic coral reef microbiota: community spatial structure, rare members and nitrogen-cycling guilds.

Gaidos E, Rusch A, Ilardo M.

Environ Microbiol. 2011 May;13(5):1138-52. doi: 10.1111/j.1462-2920.2010.02392.x. Epub 2010 Dec 22.

PMID:
21176054
12.

Activity profiles for marine sponge-associated bacteria obtained by 16S rRNA vs 16S rRNA gene comparisons.

Kamke J, Taylor MW, Schmitt S.

ISME J. 2010 Apr;4(4):498-508. doi: 10.1038/ismej.2009.143. Epub 2010 Jan 7.

PMID:
20054355
13.

Expressed 2-5A synthetase genes and pseudogenes in the marine sponge Geodia barretti.

Vallmann K, Aas N, Reintamm T, Lopp A, Kuusksalu A, Kelve M.

Gene. 2011 Jun 1;478(1-2):42-9. doi: 10.1016/j.gene.2011.01.014. Epub 2011 Jan 25.

PMID:
21272622
14.

Pyrosequencing reveals diverse and distinct sponge-specific microbial communities in sponges from a single geographical location in Irish waters.

Jackson SA, Kennedy J, Morrissey JP, O'Gara F, Dobson AD.

Microb Ecol. 2012 Jul;64(1):105-16. doi: 10.1007/s00248-011-0002-x. Epub 2012 Jan 28.

PMID:
22281804
15.

Novel predominant archaeal and bacterial groups revealed by molecular analysis of an anaerobic sludge digester.

Chouari R, Le Paslier D, Daegelen P, Ginestet P, Weissenbach J, Sghir A.

Environ Microbiol. 2005 Aug;7(8):1104-15.

PMID:
16011748
16.

Phylogenetic characterization of a biogas plant microbial community integrating clone library 16S-rDNA sequences and metagenome sequence data obtained by 454-pyrosequencing.

Kröber M, Bekel T, Diaz NN, Goesmann A, Jaenicke S, Krause L, Miller D, Runte KJ, Viehöver P, Pühler A, Schlüter A.

J Biotechnol. 2009 Jun 1;142(1):38-49. doi: 10.1016/j.jbiotec.2009.02.010. Epub 2009 Feb 27.

PMID:
19480946
17.

Microbial communities associated with the invasive Hawaiian sponge Mycale armata.

Wang G, Yoon SH, Lefait E.

ISME J. 2009 Mar;3(3):374-7. doi: 10.1038/ismej.2008.107. Epub 2008 Nov 6.

PMID:
18987678
18.

Functional bacterial and archaeal community structures of major trophic groups in a full-scale anaerobic sludge digester.

Ariesyady HD, Ito T, Okabe S.

Water Res. 2007 Apr;41(7):1554-68. Epub 2007 Feb 8.

PMID:
17291558
19.

Insights into the phylogeny and metabolic potential of a primary tropical peat swamp forest microbial community by metagenomic analysis.

Kanokratana P, Uengwetwanit T, Rattanachomsri U, Bunterngsook B, Nimchua T, Tangphatsornruang S, Plengvidhya V, Champreda V, Eurwilaichitr L.

Microb Ecol. 2011 Apr;61(3):518-28. doi: 10.1007/s00248-010-9766-7. Epub 2010 Nov 6.

PMID:
21057783
20.

Sponge-specific clusters revisited: a comprehensive phylogeny of sponge-associated microorganisms.

Simister RL, Deines P, Botté ES, Webster NS, Taylor MW.

Environ Microbiol. 2012 Feb;14(2):517-24. doi: 10.1111/j.1462-2920.2011.02664.x. Epub 2011 Dec 12.

PMID:
22151434
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