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Horizontal transfer of chloroplast genomes between plant species.

Stegemann S, Keuthe M, Greiner S, Bock R.

Proc Natl Acad Sci U S A. 2012 Feb 14;109(7):2434-8. doi: 10.1073/pnas.1114076109. Epub 2012 Jan 30.


Gene duplication, transfer, and evolution in the chloroplast genome.

Xiong AS, Peng RH, Zhuang J, Gao F, Zhu B, Fu XY, Xue Y, Jin XF, Tian YS, Zhao W, Yao QH.

Biotechnol Adv. 2009 Jul-Aug;27(4):340-7. Review.


Conservation of plastid sequences in the plant nuclear genome for millions of years facilitates endosymbiotic evolution.

Rousseau-Gueutin M, Ayliffe MA, Timmis JN.

Plant Physiol. 2011 Dec;157(4):2181-93. doi: 10.1104/pp.111.185074. Epub 2011 Oct 27.


Evolutionary variations in DNA sequences transferred from chloroplast genomes to mitochondrial genomes in the Gramineae.

Watanabe N, Nakazono M, Kanno A, Tsutsumi N, Hirai A.

Curr Genet. 1994 Nov-Dec;26(5-6):512-8.


Mutational decay and age of chloroplast and mitochondrial genomes transferred recently to angiosperm nuclear chromosomes.

Huang CY, Grünheit N, Ahmadinejad N, Timmis JN, Martin W.

Plant Physiol. 2005 Jul;138(3):1723-33. Epub 2005 Jun 10.


Nuclear genome diversity in somatic cells is accelerated by environmental stress.

Wang D, Lloyd AH, Timmis JN.

Plant Signal Behav. 2012 May;7(5):595-7. doi: 10.4161/psb.19871. Epub 2012 Apr 20.


Parallel rate heterogeneity in chloroplast and mitochondrial genomes of Brazil nut trees (Lecythidaceae) is consistent with lineage effects.

Soria-Hernanz DF, Braverman JM, Hamilton MB.

Mol Biol Evol. 2008 Jul;25(7):1282-96. doi: 10.1093/molbev/msn074. Epub 2008 Apr 2.


The complete chloroplast and mitochondrial genome sequences of Boea hygrometrica: insights into the evolution of plant organellar genomes.

Zhang T, Fang Y, Wang X, Deng X, Zhang X, Hu S, Yu J.

PLoS One. 2012;7(1):e30531. doi: 10.1371/journal.pone.0030531. Epub 2012 Jan 23.


Patterns of genomic integration of nuclear chloroplast DNA fragments in plant species.

Yoshida T, Furihata HY, Kawabe A.

DNA Res. 2014;21(2):127-40. doi: 10.1093/dnares/dst045. Epub 2013 Oct 29.


High-frequency gene transfer from the chloroplast genome to the nucleus.

Stegemann S, Hartmann S, Ruf S, Bock R.

Proc Natl Acad Sci U S A. 2003 Jul 22;100(15):8828-33. Epub 2003 Jun 19.


Evolutionary aspects of "chloroplast-like" trnN and trnH expression in higher-plant mitochondria.

Fey J, Dietrich A, Cosset A, Desprez T, Maréchal-Drouard L.

Curr Genet. 1997 Nov;32(5):358-60.


A fragment of chloroplast DNA was transferred horizontally, probably from non-eudicots, to mitochondrial genome of Phaseolus.

Woloszynska M, Bocer T, Mackiewicz P, Janska H.

Plant Mol Biol. 2004 Nov;56(5):811-20. Epub 2005 Mar 24.


Mitochondrial DNA of Vitis vinifera and the issue of rampant horizontal gene transfer.

Goremykin VV, Salamini F, Velasco R, Viola R.

Mol Biol Evol. 2009 Jan;26(1):99-110. doi: 10.1093/molbev/msn226. Epub 2008 Oct 14.


De novo assembly of the carrot mitochondrial genome using next generation sequencing of whole genomic DNA provides first evidence of DNA transfer into an angiosperm plastid genome.

Iorizzo M, Senalik D, Szklarczyk M, Grzebelus D, Spooner D, Simon P.

BMC Plant Biol. 2012 May 1;12:61. doi: 10.1186/1471-2229-12-61.


Transposition of a bacterial insertion sequence in chloroplasts.

Kohl S, Bock R.

Plant J. 2009 May;58(3):423-36. doi: 10.1111/j.1365-313X.2009.03787.x. Epub 2009 Jan 6.


Evolutionary analysis of Arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus.

Martin W, Rujan T, Richly E, Hansen A, Cornelsen S, Lins T, Leister D, Stoebe B, Hasegawa M, Penny D.

Proc Natl Acad Sci U S A. 2002 Sep 17;99(19):12246-51. Epub 2002 Sep 6.


Plastid DNA in the nucleus: new genes for old.

Rousseau-Gueutin M, Ayliffe MA, Timmis JN.

Plant Signal Behav. 2012 Feb;7(2):269-72. doi: 10.4161/psb.18762. Epub 2012 Feb 1.

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