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Items: 1 to 20 of 120

1.

Mono-allelic retrotransposon insertion addresses epigenetic transcriptional repression in human genome.

Byun HM, Heo K, Mitchell KJ, Yang AS.

J Biomed Sci. 2012 Feb 2;19:13. doi: 10.1186/1423-0127-19-13.

2.

PROGINS Alu insertion and human genomic diversity.

Donaldson CJ, Crapanzano JP, Watson JC, Levine EA, Batzer MA.

Mutat Res. 2002 Apr 25;501(1-2):137-41.

PMID:
11934445
3.

Large-scale analysis of the Alu Ya5 and Yb8 subfamilies and their contribution to human genomic diversity.

Carroll ML, Roy-Engel AM, Nguyen SV, Salem AH, Vogel E, Vincent B, Myers J, Ahmad Z, Nguyen L, Sammarco M, Watkins WS, Henke J, Makalowski W, Jorde LB, Deininger PL, Batzer MA.

J Mol Biol. 2001 Aug 3;311(1):17-40.

PMID:
11469855
4.

Recently integrated Alu elements and human genomic diversity.

Salem AH, Kilroy GE, Watkins WS, Jorde LB, Batzer MA.

Mol Biol Evol. 2003 Aug;20(8):1349-61. Epub 2003 May 30.

5.

Recently integrated Alu retrotransposons are essentially neutral residents of the human genome.

Cordaux R, Lee J, Dinoso L, Batzer MA.

Gene. 2006 May 24;373:138-44. Epub 2006 Mar 9.

PMID:
16527433
6.

Identification of human-specific AluS elements through comparative genomics.

Lee J, Kim YJ, Mun S, Kim HS, Han K.

Gene. 2015 Jan 25;555(2):208-16. doi: 10.1016/j.gene.2014.11.005. Epub 2014 Nov 7.

PMID:
25447892
7.

Non-traditional Alu evolution and primate genomic diversity.

Roy-Engel AM, Carroll ML, El-Sawy M, Salem AH, Garber RK, Nguyen SV, Deininger PL, Batzer MA.

J Mol Biol. 2002 Mar 8;316(5):1033-40.

PMID:
11884141
8.

Loss of epigenetic silencing in tumors preferentially affects primate-specific retroelements.

Szpakowski S, Sun X, Lage JM, Dyer A, Rubinstein J, Kowalski D, Sasaki C, Costa J, Lizardi PM.

Gene. 2009 Dec 15;448(2):151-67. doi: 10.1016/j.gene.2009.08.006. Epub 2009 Aug 21.

9.

Alu repeats and human genomic diversity.

Batzer MA, Deininger PL.

Nat Rev Genet. 2002 May;3(5):370-9. Review.

PMID:
11988762
10.

[Alu repeats in the human genome].

Khitrinskaia IIu, Stepanov VA, Puzyrev VP.

Mol Biol (Mosk). 2003 May-Jun;37(3):382-91. Review. Russian.

PMID:
12815945
11.

A mobile threat to genome stability: The impact of non-LTR retrotransposons upon the human genome.

Konkel MK, Batzer MA.

Semin Cancer Biol. 2010 Aug;20(4):211-21. doi: 10.1016/j.semcancer.2010.03.001. Epub 2010 Mar 20. Review.

12.

Comprehensive analysis of two Alu Yd subfamilies.

Xing J, Salem AH, Hedges DJ, Kilroy GE, Watkins WS, Schienman JE, Stewart CB, Jurka J, Jorde LB, Batzer MA.

J Mol Evol. 2003;57 Suppl 1:S76-89.

PMID:
15008405
13.

Aberrant methylation and associated transcriptional mobilization of Alu elements contributes to genomic instability in hypoxia.

Pal A, Srivastava T, Sharma MK, Mehndiratta M, Das P, Sinha S, Chattopadhyay P.

J Cell Mol Med. 2010 Nov;14(11):2646-54. doi: 10.1111/j.1582-4934.2009.00792.x.

14.

Comprehensive analysis of Alu-associated diversity on the human sex chromosomes.

Callinan PA, Hedges DJ, Salem AH, Xing J, Walker JA, Garber RK, Watkins WS, Bamshad MJ, Jorde LB, Batzer MA.

Gene. 2003 Oct 23;317(1-2):103-10.

PMID:
14604797
15.

Epigenomic analysis of Alu repeats in human ependymomas.

Xie H, Wang M, Bonaldo Mde F, Rajaram V, Stellpflug W, Smith C, Arndt K, Goldman S, Tomita T, Soares MB.

Proc Natl Acad Sci U S A. 2010 Apr 13;107(15):6952-7. doi: 10.1073/pnas.0913836107. Epub 2010 Mar 29.

16.

Genome-wide analysis of the human Alu Yb-lineage.

Carter AB, Salem AH, Hedges DJ, Keegan CN, Kimball B, Walker JA, Watkins WS, Jorde LB, Batzer MA.

Hum Genomics. 2004 Mar;1(3):167-78.

17.

Whole genome computational comparative genomics: A fruitful approach for ascertaining Alu insertion polymorphisms.

Wang J, Song L, Gonder MK, Azrak S, Ray DA, Batzer MA, Tishkoff SA, Liang P.

Gene. 2006 Jan 3;365:11-20. Epub 2006 Jan 10.

19.

Why are young and old repetitive elements distributed differently in the human genome?

Belle EM, Webster MT, Eyre-Walker A.

J Mol Evol. 2005 Mar;60(3):290-6.

PMID:
15871040
20.

CGGBP1 mitigates cytosine methylation at repetitive DNA sequences.

Agarwal P, Collier P, Fritz MH, Benes V, Wiklund HJ, Westermark B, Singh U.

BMC Genomics. 2015 May 16;16:390. doi: 10.1186/s12864-015-1593-2.

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