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1.

XML schemas and mark-up practices of taxonomic literature.

Penev L, Lyal CH, Weitzman A, Morse DR, King D, Sautter G, Georgiev T, Morris RA, Catapano T, Agosti D.

Zookeys. 2011;(150):89-116. doi: 10.3897/zookeys.150.2213. Epub 2011 Nov 28.

2.

Semantic tagging of and semantic enhancements to systematics papers: ZooKeys working examples.

Penev L, Agosti D, Georgiev T, Catapano T, Miller J, Blagoderov V, Roberts D, Smith VS, Brake I, Ryrcroft S, Scott B, Johnson NF, Morris RA, Sautter G, Chavan V, Robertson T, Remsen D, Stoev P, Parr C, Knapp S, Kress WJ, Thompson CF, Erwin T.

Zookeys. 2010 Jun 30;(50):1-16. doi: 10.3897/zookeys.50.538.

3.

DTDs go XML schema--a tools perspective.

Schweiger R, Hoelzer S, Heitmann KU, Dudeck J.

Med Inform Internet Med. 2001 Oct-Dec;26(4):297-308.

PMID:
11783713
4.

Designing XML schemas for bioinformatics.

Bruhn RE, Burton PJ.

Biotechniques. 2003 Jun;34(6):1200-2, 1204, 1206 passim.

PMID:
12813888
5.

XML Schema Representation of DICOM Structured Reporting.

Lee KP, Hu J.

J Am Med Inform Assoc. 2003 Mar-Apr;10(2):213-23.

6.

Taxonomic information exchange and copyright: the Plazi approach.

Agosti D, Egloff W.

BMC Res Notes. 2009 Mar 30;2:53. doi: 10.1186/1756-0500-2-53.

7.

Integrating and visualizing primary data from prospective and legacy taxonomic literature.

Miller JA, Agosti D, Penev L, Sautter G, Georgiev T, Catapano T, Patterson D, King D, Pereira S, Vos RA, Sierra S.

Biodivers Data J. 2015 May 12;(3):e5063. doi: 10.3897/BDJ.3.e5063. eCollection 2015.

8.

Extending the tissue microarray data exchange specification for inclusion of data analysis results.

Lyttleton O, Wright A, Treanor D, Quirke P, Lewis P.

J Pathol Inform. 2011 Mar 31;2:17. doi: 10.4103/2153-3539.78263.

9.

Using XML to encode TMA DES metadata.

Lyttleton O, Wright A, Treanor D, Lewis P.

J Pathol Inform. 2011;2:40. doi: 10.4103/2153-3539.84233. Epub 2011 Aug 24.

10.

Value of XML in the implementation of clinical practice guidelines--the issue of content retrieval and presentation.

Hoelzer S, Schweiger RK, Boettcher HA, Tafazzoli AG, Dudeck J.

Med Inform Internet Med. 2001 Apr-Jun;26(2):131-46.

PMID:
11560293
11.

Generating XML schemas for DICOM structured reporting templates.

Zhao L, Lee KP, Hu J.

J Am Med Inform Assoc. 2005 Jan-Feb;12(1):72-83. Epub 2004 Oct 18.

12.

Semantic validation of standard-based electronic health record documents with W3C XML schema.

Rinner C, Janzek-Hawlat S, Sibinovic S, Duftschmid G.

Methods Inf Med. 2010;49(3):271-80. doi: 10.3414/ME09-02-0027. Epub 2010 Apr 20.

PMID:
20405091
13.

Chemical markup, XML, and the World Wide Web. 4. CML schema.

Murray-Rust P, Rzepa HS.

J Chem Inf Comput Sci. 2003 May-Jun;43(3):757-72.

PMID:
12767134
14.

Taxonomic markup language: applying XML to systematic data.

Gilmour R.

Bioinformatics. 2000 Apr;16(4):406-7.

15.

Definition of an XML markup language for clinical laboratory procedures and comparison with generic XML markup.

Saadawi GM, Harrison JH Jr.

Clin Chem. 2006 Oct;52(10):1943-51. Epub 2006 Aug 3.

16.

XML schemas for common bioinformatic data types and their application in workflow systems.

Seibel PN, Krüger J, Hartmeier S, Schwarzer K, Löwenthal K, Mersch H, Dandekar T, Giegerich R.

BMC Bioinformatics. 2006 Nov 6;7:490.

17.

[Classical and non-classical taxonomy: where does the boundary pass?].

Pavlinov IIa.

Zh Obshch Biol. 2006 Mar-Apr;67(2):83-106. Review. Russian.

PMID:
16756105
18.
19.

Development of a deterministic XML schema by resolving structure ambiguity of HL7 messages.

Huang EW, Wang DW, Liou DM.

Comput Methods Programs Biomed. 2005 Oct;80(1):1-15.

PMID:
15993979
20.

Semi-automated XML markup of biosystematic legacy literature with the GoldenGATE editor.

Sautter G, Böhm K, Agosti D.

Pac Symp Biocomput. 2007:391-402.

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