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Results: 1 to 20 of 160

1.

Methodology for reconstructing early zebrafish development from in vivo multiphoton microscopy.

Luengo-Oroz MA, Rubio-Guivernau JL, Faure E, Savy T, Duloquin L, Olivier N, Pastor D, Ledesma-Carbayo M, Débarre D, Bourgine P, Beaurepaire E, Peyriéras N, Santos A.

IEEE Trans Image Process. 2012 Apr;21(4):2335-40. doi: 10.1109/TIP.2011.2177911. Epub 2011 Dec 1.

PMID:
22155959
[PubMed - indexed for MEDLINE]
2.

Velocimetric third-harmonic generation microscopy: micrometer-scale quantification of morphogenetic movements in unstained embryos.

Débarre D, Supatto W, Farge E, Moulia B, Schanne-Klein MC, Beaurepaire E.

Opt Lett. 2004 Dec 15;29(24):2881-3.

PMID:
15645811
[PubMed - indexed for MEDLINE]
3.

Segmentation of cells from 3-D confocal images of live zebrafish embryo.

Zanella C, Rizzi B, Melani C, Campana M, Bourgine P, Mikula K, Peyriéras N, Sarti A.

Conf Proc IEEE Eng Med Biol Soc. 2007;2007:6028-31.

PMID:
18003388
[PubMed - indexed for MEDLINE]
4.

Cells tracking in a live zebrafish embryo.

Melani C, Campana M, Lombardot B, Rizzi B, Veronesi F, Zanella C, Bourgine P, Mikula K, Peyriéras N, Sarti A.

Conf Proc IEEE Eng Med Biol Soc. 2007;2007:1631-4.

PMID:
18002285
[PubMed - indexed for MEDLINE]
5.

Cell tracking in fluorescence images of embryogenesis processes with morphological reconstruction by 4D-tubular structuring elements.

Pastor D, Luengo-Oroz MA, Lombardot B, Gonzalvez I, Duloquin L, Savy T, Bourgine P, Peyrieras N, Santos A.

Conf Proc IEEE Eng Med Biol Soc. 2009;2009:970-3. doi: 10.1109/IEMBS.2009.5333756.

PMID:
19964254
[PubMed - indexed for MEDLINE]
6.

Cell morphodynamics visualization from images of zebrafish embryogenesis.

Campana M, Sarti A.

Comput Med Imaging Graph. 2010 Jul;34(5):394-403. doi: 10.1016/j.compmedimag.2010.01.003. Epub 2010 Feb 19.

PMID:
20171844
[PubMed - indexed for MEDLINE]
7.

3D+t morphological processing: applications to embryogenesis image analysis.

Luengo-Oroz MA, Pastor-Escuredo D, Castro-Gonzalez C, Faure E, Savy T, Lombardot B, Rubio-Guivernau JL, Duloquin L, Ledesma-Carbayo MJ, Bourgine P, Peyrieras N, Santos A.

IEEE Trans Image Process. 2012 Aug;21(8):3518-30. doi: 10.1109/TIP.2012.2197007. Epub 2012 May 1.

PMID:
22562755
[PubMed - indexed for MEDLINE]
8.

3D early embryogenesis image filtering by nonlinear partial differential equations.

Krivá Z, Mikula K, Peyriéras N, Rizzi B, Sarti A, Stasová O.

Med Image Anal. 2010 Aug;14(4):510-26. doi: 10.1016/j.media.2010.03.003. Epub 2010 Apr 10.

PMID:
20457535
[PubMed - indexed for MEDLINE]
9.

Introduction to the quantitative analysis of two-dimensional fluorescence microscopy images for cell-based screening.

Ljosa V, Carpenter AE.

PLoS Comput Biol. 2009 Dec;5(12):e1000603. doi: 10.1371/journal.pcbi.1000603. Epub 2009 Dec 24. No abstract available.

PMID:
20041172
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Automatic centerline extraction of irregular tubular structures using probability volumes from multiphoton imaging.

Santamaría-Pang A, Colbert CM, Saggau P, Kakadiaris IA.

Med Image Comput Comput Assist Interv. 2007;10(Pt 2):486-94.

PMID:
18044604
[PubMed - indexed for MEDLINE]
11.

Evaluation of segmentation algorithms on cell populations using CDF curves.

Hagwood C, Bernal J, Halter M, Elliott J.

IEEE Trans Med Imaging. 2012 Feb;31(2):380-90. doi: 10.1109/TMI.2011.2169806. Epub 2011 Sep 29.

PMID:
21965194
[PubMed - indexed for MEDLINE]
12.

3-D zebrafish embryo image filtering by nonlinear partial differential equations.

Rizzi B, Campana M, Zanella C, Melani C, Cunderlik R, Krivá Z, Bourgine P, Mikula K, Peyriéras N, Sarti A.

Conf Proc IEEE Eng Med Biol Soc. 2007;2007:6252-5.

PMID:
18003450
[PubMed - indexed for MEDLINE]
13.

Cell lineage reconstruction of early zebrafish embryos using label-free nonlinear microscopy.

Olivier N, Luengo-Oroz MA, Duloquin L, Faure E, Savy T, Veilleux I, Solinas X, Débarre D, Bourgine P, Santos A, Peyriéras N, Beaurepaire E.

Science. 2010 Aug 20;329(5994):967-71. doi: 10.1126/science.1189428.

PMID:
20724640
[PubMed - indexed for MEDLINE]
Free Article
14.

Non-rigid registration of 3D multi-channel microscopy images of cell nuclei.

Yang S, Köhler D, Teller K, Cremer T, Le Baccon P, Heard E, Eils R, Rohr K.

Med Image Comput Comput Assist Interv. 2006;9(Pt 1):907-14.

PMID:
17354977
[PubMed - indexed for MEDLINE]
15.

A multiple hypothesis based method for particle tracking and its extension for cell segmentation.

Liang L, Shen H, Rompolas P, Greco V, De Camilli P, Duncan JS.

Inf Process Med Imaging. 2013;23:98-109.

PMID:
24683961
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Automatic 3D segmentation of multiphoton images: a key step for the quantification of human skin.

Decencière E, Tancrède-Bohin E, Dokládal P, Koudoro S, Pena AM, Baldeweck T.

Skin Res Technol. 2013 May;19(2):115-24. doi: 10.1111/srt.12019. Epub 2013 Feb 26.

PMID:
23441573
[PubMed - indexed for MEDLINE]
17.

Nonlinear optical microscopy: use of second harmonic generation and two-photon microscopy for automated quantitative liver fibrosis studies.

Sun W, Chang S, Tai DC, Tan N, Xiao G, Tang H, Yu H.

J Biomed Opt. 2008 Nov-Dec;13(6):064010. doi: 10.1117/1.3041159.

PMID:
19123657
[PubMed - indexed for MEDLINE]
18.

Robust 3D reconstruction and identification of dendritic spines from optical microscopy imaging.

Janoos F, Mosaliganti K, Xu X, Machiraju R, Huang K, Wong ST.

Med Image Anal. 2009 Feb;13(1):167-79. doi: 10.1016/j.media.2008.06.019. Epub 2008 Jul 24.

PMID:
18819835
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

On the fundamental imaging-depth limit in two-photon microscopy.

Theer P, Denk W.

J Opt Soc Am A Opt Image Sci Vis. 2006 Dec;23(12):3139-49.

PMID:
17106469
[PubMed - indexed for MEDLINE]
20.

Differentiation of normal and cancerous lung tissues by multiphoton imaging.

Wang CC, Li FC, Wu RJ, Hovhannisyan VA, Lin WC, Lin SJ, So PT, Dong CY.

J Biomed Opt. 2009 Jul-Aug;14(4):044034. doi: 10.1117/1.3210768.

PMID:
19725745
[PubMed - indexed for MEDLINE]

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