Format
Sort by

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 101

1.

Human DNA polymerase η is pre-aligned for dNTP binding and catalysis.

Ummat A, Silverstein TD, Jain R, Buku A, Johnson RE, Prakash L, Prakash S, Aggarwal AK.

J Mol Biol. 2012 Jan 27;415(4):627-34. doi: 10.1016/j.jmb.2011.11.038. Epub 2011 Nov 29.

2.
3.

Crystal structures of human DNA polymerase beta complexed with DNA: implications for catalytic mechanism, processivity, and fidelity.

Pelletier H, Sawaya MR, Wolfle W, Wilson SH, Kraut J.

Biochemistry. 1996 Oct 1;35(39):12742-61.

PMID:
8841118
4.

DNA polymerase beta: contributions of template-positioning and dNTP triphosphate-binding residues to catalysis and fidelity.

Kraynov VS, Showalter AK, Liu J, Zhong X, Tsai MD.

Biochemistry. 2000 Dec 26;39(51):16008-15.

PMID:
11123928
5.

Conformational changes during normal and error-prone incorporation of nucleotides by a Y-family DNA polymerase detected by 2-aminopurine fluorescence.

DeLucia AM, Grindley ND, Joyce CM.

Biochemistry. 2007 Sep 25;46(38):10790-803. Epub 2007 Aug 29.

PMID:
17725324
6.

Structural mechanism of ribonucleotide discrimination by a Y-family DNA polymerase.

Kirouac KN, Suo Z, Ling H.

J Mol Biol. 2011 Apr 1;407(3):382-90. doi: 10.1016/j.jmb.2011.01.037. Epub 2011 Feb 3.

PMID:
21295588
7.

Crystal structure of a pol alpha family DNA polymerase from the hyperthermophilic archaeon Thermococcus sp. 9 degrees N-7.

Rodriguez AC, Park HW, Mao C, Beese LS.

J Mol Biol. 2000 Jun 2;299(2):447-62.

PMID:
10860752
9.
10.

DNA polymerase beta: pre-steady-state kinetic analysis and roles of arginine-283 in catalysis and fidelity.

Werneburg BG, Ahn J, Zhong X, Hondal RJ, Kraynov VS, Tsai MD.

Biochemistry. 1996 Jun 4;35(22):7041-50.

PMID:
8679529
11.

Y-Family DNA polymerases may use two different dNTP shapes for insertion: a hypothesis and its implications.

Chandani S, Loechler EL.

J Mol Graph Model. 2009 Apr;27(7):759-69. doi: 10.1016/j.jmgm.2008.11.003. Epub 2008 Nov 8.

12.

A model for DNA polymerase translocation: worm-like movement of DNA within the binding cleft.

Wlassoff WA, Dymshits GM, Lavrik OI.

FEBS Lett. 1996 Jul 15;390(1):6-9. Review.

13.

Recent insight into the kinetic mechanisms and conformational dynamics of Y-Family DNA polymerases.

Maxwell BA, Suo Z.

Biochemistry. 2014 May 6;53(17):2804-14. doi: 10.1021/bi5000405. Epub 2014 Apr 23. Review.

14.

Kinetic mechanisms governing stable ribonucleotide incorporation in individual DNA polymerase complexes.

Dahl JM, Wang H, Lázaro JM, Salas M, Lieberman KR.

Biochemistry. 2014 Dec 30;53(51):8061-76. doi: 10.1021/bi501216a. Epub 2014 Dec 18.

15.

RB69 DNA polymerase structure, kinetics, and fidelity.

Xia S, Konigsberg WH.

Biochemistry. 2014 May 6;53(17):2752-67. doi: 10.1021/bi4014215. Epub 2014 Apr 23. Review.

16.

Snapshots of a Y-family DNA polymerase in replication: substrate-induced conformational transitions and implications for fidelity of Dpo4.

Wong JH, Fiala KA, Suo Z, Ling H.

J Mol Biol. 2008 May 30;379(2):317-30. doi: 10.1016/j.jmb.2008.03.038. Epub 2008 Mar 28.

PMID:
18448122
17.

phi29 DNA polymerase active site: role of residue Val250 as metal-dNTP complex ligand and in protein-primed initiation.

Pérez-Arnaiz P, Lázaro JM, Salas M, de Vega M.

J Mol Biol. 2010 Jan 15;395(2):223-33. doi: 10.1016/j.jmb.2009.10.061. Epub 2009 Oct 31.

PMID:
19883660
18.

Structure and mechanism of human DNA polymerase eta.

Biertümpfel C, Zhao Y, Kondo Y, Ramón-Maiques S, Gregory M, Lee JY, Masutani C, Lehmann AR, Hanaoka F, Yang W.

Nature. 2010 Jun 24;465(7301):1044-8. doi: 10.1038/nature09196. Erratum in: Nature. 2011 Aug 18;476(7360):360.

19.

Bidentate and tridentate metal-ion coordination states within ternary complexes of RB69 DNA polymerase.

Xia S, Eom SH, Konigsberg WH, Wang J.

Protein Sci. 2012 Mar;21(3):447-51. doi: 10.1002/pro.2026. Epub 2012 Jan 31.

Items per page

Supplemental Content

Write to the Help Desk