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Results: 1 to 20 of 102

1.

Active chromatin and noncoding RNAs: an intimate relationship.

Flynn RA, Chang HY.

Curr Opin Genet Dev. 2012 Apr;22(2):172-8. doi: 10.1016/j.gde.2011.11.002. Epub 2011 Dec 7. Review.

PMID:
22154525
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Emerging similarities in epigenetic gene silencing by long noncoding RNAs.

Nagano T, Fraser P.

Mamm Genome. 2009 Sep-Oct;20(9-10):557-62. doi: 10.1007/s00335-009-9218-1. Epub 2009 Sep 1. Review.

PMID:
19727951
[PubMed - indexed for MEDLINE]
3.

A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression.

Wang KC, Yang YW, Liu B, Sanyal A, Corces-Zimmerman R, Chen Y, Lajoie BR, Protacio A, Flynn RA, Gupta RA, Wysocka J, Lei M, Dekker J, Helms JA, Chang HY.

Nature. 2011 Apr 7;472(7341):120-4. doi: 10.1038/nature09819. Epub 2011 Mar 20.

PMID:
21423168
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Enhancer biology and enhanceropathies.

Smith E, Shilatifard A.

Nat Struct Mol Biol. 2014 Mar;21(3):210-9. doi: 10.1038/nsmb.2784. Review.

PMID:
24599251
[PubMed - indexed for MEDLINE]
5.

Chromatin associated sense and antisense noncoding RNAs are transcribed from the var gene family of virulence genes of the malaria parasite Plasmodium falciparum.

Epp C, Li F, Howitt CA, Chookajorn T, Deitsch KW.

RNA. 2009 Jan;15(1):116-27. doi: 10.1261/rna.1080109. Epub 2008 Nov 26.

PMID:
19037012
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Long noncoding RNA in genome regulation: prospects and mechanisms.

Hung T, Chang HY.

RNA Biol. 2010 Sep-Oct;7(5):582-5. Epub 2010 Sep 1.

PMID:
20930520
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Long noncoding RNAs, chromatin, and development.

Caley DP, Pink RC, Trujillano D, Carter DR.

ScientificWorldJournal. 2010 Jan 8;10:90-102. doi: 10.1100/tsw.2010.7. Review.

PMID:
20062956
[PubMed - indexed for MEDLINE]
Free Article
8.

Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis.

Pauli A, Valen E, Lin MF, Garber M, Vastenhouw NL, Levin JZ, Fan L, Sandelin A, Rinn JL, Regev A, Schier AF.

Genome Res. 2012 Mar;22(3):577-91. doi: 10.1101/gr.133009.111. Epub 2011 Nov 22.

PMID:
22110045
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

The role of long non-coding RNAs in chromatin structure and gene regulation: variations on a theme.

Umlauf D, Fraser P, Nagano T.

Biol Chem. 2008 Apr;389(4):323-31. doi: 10.1515/BC.2008.047. Review.

PMID:
18225988
[PubMed - indexed for MEDLINE]
10.

Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs.

Rinn JL, Kertesz M, Wang JK, Squazzo SL, Xu X, Brugmann SA, Goodnough LH, Helms JA, Farnham PJ, Segal E, Chang HY.

Cell. 2007 Jun 29;129(7):1311-23.

PMID:
17604720
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Genomic maps of long noncoding RNA occupancy reveal principles of RNA-chromatin interactions.

Chu C, Qu K, Zhong FL, Artandi SE, Chang HY.

Mol Cell. 2011 Nov 18;44(4):667-78. doi: 10.1016/j.molcel.2011.08.027. Epub 2011 Sep 29.

PMID:
21963238
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

De novo DNA demethylation and noncoding transcription define active intergenic regulatory elements.

Schlesinger F, Smith AD, Gingeras TR, Hannon GJ, Hodges E.

Genome Res. 2013 Oct;23(10):1601-14. doi: 10.1101/gr.157271.113. Epub 2013 Jun 28.

PMID:
23811145
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Long non-coding RNA modifies chromatin: epigenetic silencing by long non-coding RNAs.

Saxena A, Carninci P.

Bioessays. 2011 Nov;33(11):830-9. doi: 10.1002/bies.201100084. Epub 2011 Sep 14. Review.

PMID:
21915889
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Roles of long noncoding RNAs in brain development, functional diversification and neurodegenerative diseases.

Wu P, Zuo X, Deng H, Liu X, Liu L, Ji A.

Brain Res Bull. 2013 Aug;97:69-80. doi: 10.1016/j.brainresbull.2013.06.001. Epub 2013 Jun 10. Review.

PMID:
23756188
[PubMed - indexed for MEDLINE]
15.

Regulation of chromatin structure by long noncoding RNAs: focus on natural antisense transcripts.

Magistri M, Faghihi MA, St Laurent G 3rd, Wahlestedt C.

Trends Genet. 2012 Aug;28(8):389-96. doi: 10.1016/j.tig.2012.03.013. Epub 2012 Apr 26. Review.

PMID:
22541732
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Balance between acetylation and methylation of histone H3 lysine 9 on the E2F-responsive dihydrofolate reductase promoter.

Nicolas E, Roumillac C, Trouche D.

Mol Cell Biol. 2003 Mar;23(5):1614-22.

PMID:
12588981
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Noncoding transcription at enhancers: general principles and functional models.

Natoli G, Andrau JC.

Annu Rev Genet. 2012;46:1-19. doi: 10.1146/annurev-genet-110711-155459. Epub 2012 Aug 16. Review.

PMID:
22905871
[PubMed - indexed for MEDLINE]
18.

Differential patterns of histone methylation and acetylation distinguish active and repressed alleles at X-linked genes.

Goto Y, Gomez M, Brockdorff N, Feil R.

Cytogenet Genome Res. 2002;99(1-4):66-74.

PMID:
12900547
[PubMed - indexed for MEDLINE]
19.

Controlling transcription with noncoding RNAs in mammalian cells.

Turner AM, Morris KV.

Biotechniques. 2010 Jun;48(6):ix-xvi. doi: 10.2144/000113442. Review.

PMID:
20569216
[PubMed - indexed for MEDLINE]
Free Article
20.

Long noncoding RNA: unveiling hidden layer of gene regulatory networks.

Kim ED, Sung S.

Trends Plant Sci. 2012 Jan;17(1):16-21. doi: 10.1016/j.tplants.2011.10.008. Epub 2011 Nov 20. Review.

PMID:
22104407
[PubMed - indexed for MEDLINE]

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