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Items: 1 to 20 of 104

1.

Evolutionary significance of metabolic network properties.

Basler G, Grimbs S, Ebenhöh O, Selbig J, Nikoloski Z.

J R Soc Interface. 2012 Jun 7;9(71):1168-76. doi: 10.1098/rsif.2011.0652. Epub 2011 Nov 30.

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3.

Modular co-evolution of metabolic networks.

Zhao J, Ding GH, Tao L, Yu H, Yu ZH, Luo JH, Cao ZW, Li YX.

BMC Bioinformatics. 2007 Aug 27;8:311.

4.
5.

Evolutionary changes of metabolic networks and their biosynthetic capacities.

Ebenhöh O, Handorf T, Kahn D.

Syst Biol (Stevenage). 2006 Sep;153(5):354-8.

PMID:
16986316
6.

Structural characterization and modeling of ncRNA-protein interactions.

Nacher JC, Araki N.

Biosystems. 2010 Jul;101(1):10-9. doi: 10.1016/j.biosystems.2010.02.005. Epub 2010 Mar 4.

PMID:
20206662
7.

Biological impacts and context of network theory.

Almaas E.

J Exp Biol. 2007 May;210(Pt 9):1548-58. Review.

8.

Identification of functional modules from conserved ancestral protein-protein interactions.

Dutkowski J, Tiuryn J.

Bioinformatics. 2007 Jul 1;23(13):i149-58.

9.

Evolution of complex modular biological networks.

Hintze A, Adami C.

PLoS Comput Biol. 2008 Feb;4(2):e23. doi: 10.1371/journal.pcbi.0040023.

11.

A structural approach for finding functional modules from large biological networks.

Mete M, Tang F, Xu X, Yuruk N.

BMC Bioinformatics. 2008 Aug 12;9 Suppl 9:S19. doi: 10.1186/1471-2105-9-S9-S19.

12.

Fitting a geometric graph to a protein-protein interaction network.

Higham DJ, Rasajski M, Przulj N.

Bioinformatics. 2008 Apr 15;24(8):1093-9. doi: 10.1093/bioinformatics/btn079. Epub 2008 Mar 14.

13.

Evolutionary cores of domain co-occurrence networks.

Wuchty S, Almaas E.

BMC Evol Biol. 2005 Mar 23;5:24.

14.

Questioning the ubiquity of neofunctionalization.

Gibson TA, Goldberg DS.

PLoS Comput Biol. 2009 Jan;5(1):e1000252. doi: 10.1371/journal.pcbi.1000252. Epub 2009 Jan 2.

15.

Natural selection governs local, but not global, evolutionary gene coexpression networks in Caenorhabditis elegans.

Jordan IK, Katz LS, Denver DR, Streelman JT.

BMC Syst Biol. 2008 Nov 13;2:96. doi: 10.1186/1752-0509-2-96.

16.

The emergence and early evolution of biological carbon-fixation.

Braakman R, Smith E.

PLoS Comput Biol. 2012;8(4):e1002455. doi: 10.1371/journal.pcbi.1002455. Epub 2012 Apr 19.

17.

Maximal extraction of biological information from genetic interaction data.

Carter GW, Galas DJ, Galitski T.

PLoS Comput Biol. 2009 Apr;5(4):e1000347. doi: 10.1371/journal.pcbi.1000347. Epub 2009 Apr 3.

18.

Using likelihood-free inference to compare evolutionary dynamics of the protein networks of H. pylori and P. falciparum.

Ratmann O, Jørgensen O, Hinkley T, Stumpf M, Richardson S, Wiuf C.

PLoS Comput Biol. 2007 Nov;3(11):e230. Epub 2007 Oct 9.

19.

GraphCrunch: a tool for large network analyses.

Milenković T, Lai J, Przulj N.

BMC Bioinformatics. 2008 Jan 30;9:70. doi: 10.1186/1471-2105-9-70.

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