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Results: 1 to 20 of 159

Similar articles for PubMed (Select 22123973)

1.

Genome-wide antisense transcription drives mRNA processing in bacteria.

Lasa I, Toledo-Arana A, Dobin A, Villanueva M, de los Mozos IR, Vergara-Irigaray M, Segura V, Fagegaltier D, Penadés JR, Valle J, Solano C, Gingeras TR.

Proc Natl Acad Sci U S A. 2011 Dec 13;108(50):20172-7. doi: 10.1073/pnas.1113521108. Epub 2011 Nov 28.

2.

An effort to make sense of antisense transcription in bacteria.

Lasa I, Toledo-Arana A, Gingeras TR.

RNA Biol. 2012 Aug;9(8):1039-44. doi: 10.4161/rna.21167. Epub 2012 Aug 1.

3.

Global regulatory functions of the Staphylococcus aureus endoribonuclease III in gene expression.

Lioliou E, Sharma CM, Caldelari I, Helfer AC, Fechter P, Vandenesch F, Vogel J, Romby P.

PLoS Genet. 2012 Jun;8(6):e1002782. doi: 10.1371/journal.pgen.1002782. Epub 2012 Jun 28.

4.

Antisense transcription is pervasive but rarely conserved in enteric bacteria.

Raghavan R, Sloan DB, Ochman H.

MBio. 2012 Aug 7;3(4). pii: e00156-12. doi: 10.1128/mBio.00156-12. Print 2012.

5.

In vivo mapping of RNA-RNA interactions in Staphylococcus aureus using the endoribonuclease III.

Lioliou E, Sharma CM, Altuvia Y, Caldelari I, Romilly C, Helfer AC, Margalit H, Romby P.

Methods. 2013 Sep 15;63(2):135-43. doi: 10.1016/j.ymeth.2013.06.033. Epub 2013 Jul 9.

PMID:
23851283
6.

Staphylococcus aureus RNAIII and the endoribonuclease III coordinately regulate spa gene expression.

Huntzinger E, Boisset S, Saveanu C, Benito Y, Geissmann T, Namane A, Lina G, Etienne J, Ehresmann B, Ehresmann C, Jacquier A, Vandenesch F, Romby P.

EMBO J. 2005 Feb 23;24(4):824-35. Epub 2005 Jan 27.

7.

Loop-loop interactions involved in antisense regulation are processed by the endoribonuclease III in Staphylococcus aureus.

Romilly C, Chevalier C, Marzi S, Masquida B, Geissmann T, Vandenesch F, Westhof E, Romby P.

RNA Biol. 2012 Dec;9(12):1461-72. doi: 10.4161/rna.22710. Epub 2012 Nov 7.

PMID:
23134978
8.

Sense and antisense transcripts of convergent gene pairs in Arabidopsis thaliana can share a common polyadenylation region.

Zubko E, Kunova A, Meyer P.

PLoS One. 2011 Feb 2;6(2):e16769. doi: 10.1371/journal.pone.0016769.

9.

Processing of naturally occurring sense/antisense transcripts of the vertebrate Slc34a gene into short RNAs.

Carlile M, Nalbant P, Preston-Fayers K, McHaffie GS, Werner A.

Physiol Genomics. 2008 Jun 12;34(1):95-100. doi: 10.1152/physiolgenomics.00004.2008. Epub 2008 Apr 15.

11.

Pervasive transcription: detecting functional RNAs in bacteria.

Lybecker M, Bilusic I, Raghavan R.

Transcription. 2014;5(4):e944039. doi: 10.4161/21541272.2014.944039. Epub 2014 Oct 30.

PMID:
25483405
12.

Antisense transcript and RNA processing alterations suppress instability of polyadenylated mRNA in chlamydomonas chloroplasts.

Nishimura Y, Kikis EA, Zimmer SL, Komine Y, Stern DB.

Plant Cell. 2004 Nov;16(11):2849-69. Epub 2004 Oct 14.

13.

Transcriptome complexity in a genome-reduced bacterium.

Güell M, van Noort V, Yus E, Chen WH, Leigh-Bell J, Michalodimitrakis K, Yamada T, Arumugam M, Doerks T, Kühner S, Rode M, Suyama M, Schmidt S, Gavin AC, Bork P, Serrano L.

Science. 2009 Nov 27;326(5957):1268-71. doi: 10.1126/science.1176951.

14.

Chloroplast RNase J compensates for inefficient transcription termination by removal of antisense RNA.

Sharwood RE, Halpert M, Luro S, Schuster G, Stern DB.

RNA. 2011 Dec;17(12):2165-76. doi: 10.1261/rna.028043.111. Epub 2011 Oct 27.

15.

Staphylococcus aureus RNAIII coordinately represses the synthesis of virulence factors and the transcription regulator Rot by an antisense mechanism.

Boisset S, Geissmann T, Huntzinger E, Fechter P, Bendridi N, Possedko M, Chevalier C, Helfer AC, Benito Y, Jacquier A, Gaspin C, Vandenesch F, Romby P.

Genes Dev. 2007 Jun 1;21(11):1353-66.

16.

The double-stranded transcriptome of Escherichia coli.

Lybecker M, Zimmermann B, Bilusic I, Tukhtubaeva N, Schroeder R.

Proc Natl Acad Sci U S A. 2014 Feb 25;111(8):3134-9. doi: 10.1073/pnas.1315974111. Epub 2014 Jan 22.

17.

Overlapping transcripts, double-stranded RNA and antisense regulation: a genomic perspective.

Munroe SH, Zhu J.

Cell Mol Life Sci. 2006 Sep;63(18):2102-18. Review.

PMID:
16847578
18.

RNAIII activates map expression by forming an RNA-RNA complex in Staphylococcus aureus.

Liu Y, Mu C, Ying X, Li W, Wu N, Dong J, Gao Y, Shao N, Fan M, Yang G.

FEBS Lett. 2011 Mar 23;585(6):899-905. doi: 10.1016/j.febslet.2011.02.021. Epub 2011 Feb 22.

19.

The excludon: a new concept in bacterial antisense RNA-mediated gene regulation.

Sesto N, Wurtzel O, Archambaud C, Sorek R, Cossart P.

Nat Rev Microbiol. 2013 Feb;11(2):75-82. doi: 10.1038/nrmicro2934. Epub 2012 Dec 24.

PMID:
23268228
20.

Pervasive transcription: illuminating the dark matter of bacterial transcriptomes.

Wade JT, Grainger DC.

Nat Rev Microbiol. 2014 Sep;12(9):647-53. doi: 10.1038/nrmicro3316. Epub 2014 Jul 28.

PMID:
25069631
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