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Results: 1 to 20 of 220

1.

Computational investigation of DNA detection using graphene nanopores.

Sathe C, Zou X, Leburton JP, Schulten K.

ACS Nano. 2011 Nov 22;5(11):8842-51. doi: 10.1021/nn202989w. Epub 2011 Oct 13.

PMID:
21981556
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Assessing graphene nanopores for sequencing DNA.

Wells DB, Belkin M, Comer J, Aksimentiev A.

Nano Lett. 2012 Aug 8;12(8):4117-23. doi: 10.1021/nl301655d. Epub 2012 Jul 17.

PMID:
22780094
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Detection of long and short DNA using nanopores with graphitic polyhedral edges.

Freedman KJ, Ahn CW, Kim MJ.

ACS Nano. 2013 Jun 25;7(6):5008-16. doi: 10.1021/nn4003665. Epub 2013 Jun 6.

PMID:
23713602
[PubMed - indexed for MEDLINE]
4.

Dynamic and electronic transport properties of DNA translocation through graphene nanopores.

Avdoshenko SM, Nozaki D, Gomes da Rocha C, González JW, Lee MH, Gutierrez R, Cuniberti G.

Nano Lett. 2013 May 8;13(5):1969-76. doi: 10.1021/nl304735k. Epub 2013 Apr 17.

PMID:
23586585
[PubMed - indexed for MEDLINE]
5.

Detecting the translocation of DNA through a nanopore using graphene nanoribbons.

Traversi F, Raillon C, Benameur SM, Liu K, Khlybov S, Tosun M, Krasnozhon D, Kis A, Radenovic A.

Nat Nanotechnol. 2013 Dec;8(12):939-45. doi: 10.1038/nnano.2013.240. Epub 2013 Nov 17.

PMID:
24240429
[PubMed - indexed for MEDLINE]
6.

Single-stranded DNA within nanopores: conformational dynamics and implications for sequencing; a molecular dynamics simulation study.

Guy AT, Piggot TJ, Khalid S.

Biophys J. 2012 Sep 5;103(5):1028-36.

PMID:
23009852
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Coarse-grained molecular dynamics simulation of DNA translocation in chemically modified nanopores.

Ramachandran A, Guo Q, Iqbal SM, Liu Y.

J Phys Chem B. 2011 May 19;115(19):6138-48. doi: 10.1021/jp101052x. Epub 2011 Apr 28.

PMID:
21526788
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Graphene nanopore devices for DNA sensing.

Merchant CA, Drndić M.

Methods Mol Biol. 2012;870:211-26. doi: 10.1007/978-1-61779-773-6_12.

PMID:
22528266
[PubMed - indexed for MEDLINE]
9.

Fast DNA sequencing with a graphene-based nanochannel device.

Min SK, Kim WY, Cho Y, Kim KS.

Nat Nanotechnol. 2011 Mar;6(3):162-5. doi: 10.1038/nnano.2010.283. Epub 2011 Feb 6.

PMID:
21297626
[PubMed - indexed for MEDLINE]
10.

Tailoring the hydrophobicity of graphene for its use as nanopores for DNA translocation.

Schneider GF, Xu Q, Hage S, Luik S, Spoor JN, Malladi S, Zandbergen H, Dekker C.

Nat Commun. 2013;4:2619. doi: 10.1038/ncomms3619.

PMID:
24126320
[PubMed - indexed for MEDLINE]
11.

Molecule-hugging graphene nanopores.

Garaj S, Liu S, Golovchenko JA, Branton D.

Proc Natl Acad Sci U S A. 2013 Jul 23;110(30):12192-6. doi: 10.1073/pnas.1220012110. Epub 2013 Jul 8.

PMID:
23836648
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Transverse conductance of DNA nucleotides in a graphene nanogap from first principles.

Prasongkit J, Grigoriev A, Pathak B, Ahuja R, Scheicher RH.

Nano Lett. 2011 May 11;11(5):1941-5. doi: 10.1021/nl200147x. Epub 2011 Apr 15.

PMID:
21495701
[PubMed - indexed for MEDLINE]
13.

Spatial blockage of ionic current for electrophoretic translocation of DNA through a graphene nanopore.

Lv W, Liu S, Li X, Wu R.

Electrophoresis. 2014 Apr;35(8):1144-51. doi: 10.1002/elps.201300501. Epub 2014 Mar 5.

PMID:
24459097
[PubMed - in process]
14.

DNA translocation through graphene nanopores.

Schneider GF, Kowalczyk SW, Calado VE, Pandraud G, Zandbergen HW, Vandersypen LM, Dekker C.

Nano Lett. 2010 Aug 11;10(8):3163-7. doi: 10.1021/nl102069z.

PMID:
20608744
[PubMed - indexed for MEDLINE]
15.

Microscopic Kinetics of DNA Translocation through synthetic nanopores.

Aksimentiev A, Heng JB, Timp G, Schulten K.

Biophys J. 2004 Sep;87(3):2086-97.

PMID:
15345583
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Modeling nanopores for sequencing DNA.

Comer JR, Wells DB, Aksimentiev A.

Methods Mol Biol. 2011;749:317-58. doi: 10.1007/978-1-61779-142-0_22.

PMID:
21674382
[PubMed - indexed for MEDLINE]
17.

Stacked graphene-Al2O3 nanopore sensors for sensitive detection of DNA and DNA-protein complexes.

Venkatesan BM, Estrada D, Banerjee S, Jin X, Dorgan VE, Bae MH, Aluru NR, Pop E, Bashir R.

ACS Nano. 2012 Jan 24;6(1):441-50. doi: 10.1021/nn203769e. Epub 2011 Dec 23.

PMID:
22165962
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Electron beam induced local crystallization of HfO2 nanopores for biosensing applications.

Shim J, Rivera JA, Bashir R.

Nanoscale. 2013 Nov 21;5(22):10887-93. doi: 10.1039/c3nr02608f. Epub 2013 Aug 15.

PMID:
23945603
[PubMed - indexed for MEDLINE]
19.

Slowing the translocation of double-stranded DNA using a nanopore smaller than the double helix.

Mirsaidov U, Comer J, Dimitrov V, Aksimentiev A, Timp G.

Nanotechnology. 2010 Oct 1;21(39):395501. doi: 10.1088/0957-4484/21/39/395501. Epub 2010 Sep 1.

PMID:
20808032
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Optimization of the molecular dynamics method for simulations of DNA and ion transport through biological nanopores.

Wells DB, Bhattacharya S, Carr R, Maffeo C, Ho A, Comer J, Aksimentiev A.

Methods Mol Biol. 2012;870:165-86. doi: 10.1007/978-1-61779-773-6_10.

PMID:
22528264
[PubMed - indexed for MEDLINE]

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