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Results: 1 to 20 of 143

1.

Deciphering a methylome: what can we read into patterns of DNA methylation?

Flores KB, Amdam GV.

J Exp Biol. 2011 Oct 1;214(Pt 19):3155-63. doi: 10.1242/jeb.059741.

PMID:
21900463
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Studying the epigenome using next generation sequencing.

Ku CS, Naidoo N, Wu M, Soong R.

J Med Genet. 2011 Nov;48(11):721-30. doi: 10.1136/jmedgenet-2011-100242. Epub 2011 Aug 8. Review.

PMID:
21825079
[PubMed - indexed for MEDLINE]
3.

Epigenetic regulation of the honey bee transcriptome: unravelling the nature of methylated genes.

Foret S, Kucharski R, Pittelkow Y, Lockett GA, Maleszka R.

BMC Genomics. 2009 Oct 14;10:472. doi: 10.1186/1471-2164-10-472.

PMID:
19828049
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Determining the conservation of DNA methylation in Arabidopsis.

Widman N, Jacobsen SE, Pellegrini M.

Epigenetics. 2009 Feb 16;4(2):119-24.

PMID:
19384058
[PubMed - indexed for MEDLINE]
Free Article
5.

Functional conservation of DNA methylation in the pea aphid and the honeybee.

Hunt BG, Brisson JA, Yi SV, Goodisman MA.

Genome Biol Evol. 2010;2:719-28. doi: 10.1093/gbe/evq057. Epub 2010 Sep 20.

PMID:
20855427
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Intronic non-CG DNA hydroxymethylation and alternative mRNA splicing in honey bees.

Cingolani P, Cao X, Khetani RS, Chen CC, Coon M, Sammak A, Bollig-Fischer A, Land S, Huang Y, Hudson ME, Garfinkel MD, Zhong S, Robinson GE, Ruden DM.

BMC Genomics. 2013 Sep 30;14:666. doi: 10.1186/1471-2164-14-666.

PMID:
24079845
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Conservation and divergence of DNA methylation in eukaryotes: new insights from single base-resolution DNA methylomes.

Su Z, Han L, Zhao Z.

Epigenetics. 2011 Feb;6(2):134-40. Epub 2011 Feb 1.

PMID:
20962593
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

The honey bee epigenomes: differential methylation of brain DNA in queens and workers.

Lyko F, Foret S, Kucharski R, Wolf S, Falckenhayn C, Maleszka R.

PLoS Biol. 2010 Nov 2;8(11):e1000506. doi: 10.1371/journal.pbio.1000506. Erratum in: PLoS Biol. 2011;9(1). doi: 10.1371/annotation/2db9ee19-faa4-43f2-af7a-c8aeacca8037.

PMID:
21072239
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Bisulfite methylation profiling of large genomes.

Reinders J, Paszkowski J.

Epigenomics. 2010 Apr;2(2):209-20. doi: 10.2217/epi.10.6. Review.

PMID:
22121871
[PubMed - indexed for MEDLINE]
10.

Single base-resolution methylome of the silkworm reveals a sparse epigenomic map.

Xiang H, Zhu J, Chen Q, Dai F, Li X, Li M, Zhang H, Zhang G, Li D, Dong Y, Zhao L, Lin Y, Cheng D, Yu J, Sun J, Zhou X, Ma K, He Y, Zhao Y, Guo S, Ye M, Guo G, Li Y, Li R, Zhang X, Ma L, Kristiansen K, Guo Q, Jiang J, Beck S, Xia Q, Wang W, Wang J.

Nat Biotechnol. 2010 May;28(5):516-20. doi: 10.1038/nbt.1626. Epub 2010 May 2. Erratum in: Nat Biotechnol. 2010 Jul;28(7):756.

PMID:
20436463
[PubMed - indexed for MEDLINE]
11.

Genome-wide methylation analysis.

Unterberger A, Dubuc AM, Taylor MD.

Methods Mol Biol. 2012;863:303-17. doi: 10.1007/978-1-61779-612-8_19.

PMID:
22359302
[PubMed - indexed for MEDLINE]
12.

DNA methylation is widespread and associated with differential gene expression in castes of the honeybee, Apis mellifera.

Elango N, Hunt BG, Goodisman MA, Yi SV.

Proc Natl Acad Sci U S A. 2009 Jul 7;106(27):11206-11. doi: 10.1073/pnas.0900301106. Epub 2009 Jun 25.

PMID:
19556545
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Methylome reorganization during in vitro dedifferentiation and regeneration of Populus trichocarpa.

Vining K, Pomraning KR, Wilhelm LJ, Ma C, Pellegrini M, Di Y, Mockler TC, Freitag M, Strauss SH.

BMC Plant Biol. 2013 Jun 25;13:92. doi: 10.1186/1471-2229-13-92.

PMID:
23799904
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Genome-wide genetic variations are highly correlated with proximal DNA methylation patterns.

Qu W, Hashimoto S, Shimada A, Nakatani Y, Ichikawa K, Saito TL, Ogoshi K, Matsushima K, Suzuki Y, Sugano S, Takeda H, Morishita S.

Genome Res. 2012 Aug;22(8):1419-25. doi: 10.1101/gr.140236.112. Epub 2012 Jun 11.

PMID:
22689467
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Mining cancer methylomes: prospects and challenges.

Stirzaker C, Taberlay PC, Statham AL, Clark SJ.

Trends Genet. 2014 Feb;30(2):75-84. doi: 10.1016/j.tig.2013.11.004. Epub 2013 Dec 21. Review.

PMID:
24368016
[PubMed - indexed for MEDLINE]
16.

High-resolution analysis of cytosine methylation in ancient DNA.

Llamas B, Holland ML, Chen K, Cropley JE, Cooper A, Suter CM.

PLoS One. 2012;7(1):e30226. doi: 10.1371/journal.pone.0030226. Epub 2012 Jan 19.

PMID:
22276161
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

DNA-binding factors shape the mouse methylome at distal regulatory regions.

Stadler MB, Murr R, Burger L, Ivanek R, Lienert F, Schöler A, van Nimwegen E, Wirbelauer C, Oakeley EJ, Gaidatzis D, Tiwari VK, Schübeler D.

Nature. 2011 Dec 14;480(7378):490-5. doi: 10.1038/nature10716. Erratum in: Nature. 2012 Apr 26;484(7395):550. van Nimwegen, Erik [added].

PMID:
22170606
[PubMed - indexed for MEDLINE]
18.

Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning.

Cokus SJ, Feng S, Zhang X, Chen Z, Merriman B, Haudenschild CD, Pradhan S, Nelson SF, Pellegrini M, Jacobsen SE.

Nature. 2008 Mar 13;452(7184):215-9. doi: 10.1038/nature06745. Epub 2008 Feb 17.

PMID:
18278030
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Imprinted segments in the human genome: different DNA methylation patterns in the Prader-Willi/Angelman syndrome region as determined by the genomic sequencing method.

Zeschnigk M, Schmitz B, Dittrich B, Buiting K, Horsthemke B, Doerfler W.

Hum Mol Genet. 1997 Mar;6(3):387-95.

PMID:
9147641
[PubMed - indexed for MEDLINE]
Free Article
20.

The role of methylation of DNA in environmental adaptation.

Flores KB, Wolschin F, Amdam GV.

Integr Comp Biol. 2013 Aug;53(2):359-72. doi: 10.1093/icb/ict019. Epub 2013 Apr 25.

PMID:
23620251
[PubMed - indexed for MEDLINE]
Free PMC Article
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