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Results: 1 to 20 of 83

1.

Genome-scale integrative data analysis and modeling of dynamic processes in yeast.

Schwartz JM, Gaugain C.

Methods Mol Biol. 2011;759:427-43. doi: 10.1007/978-1-61779-173-4_24. Review.

PMID:
21863501
[PubMed - indexed for MEDLINE]
2.

Genome-scale metabolic models of Saccharomyces cerevisiae.

Nookaew I, Olivares-Hernández R, Bhumiratana S, Nielsen J.

Methods Mol Biol. 2011;759:445-63. doi: 10.1007/978-1-61779-173-4_25. Review.

PMID:
21863502
[PubMed - indexed for MEDLINE]
3.

Functional analysis of the yeast genome.

Ross-Macdonald P.

Funct Integr Genomics. 2000 Sep;1(2):99-113. Review.

PMID:
11793226
[PubMed - indexed for MEDLINE]
4.

Yeast as a touchstone in post-genomic research: strategies for integrative analysis in functional genomics.

Castrillo JI, Oliver SG.

J Biochem Mol Biol. 2004 Jan 31;37(1):93-106. Review.

PMID:
14761307
[PubMed - indexed for MEDLINE]
Free Article
5.

Saccharomyces cerevisiae: gene annotation and genome variability, state of the art through comparative genomics.

Louis E.

Methods Mol Biol. 2011;759:31-40. doi: 10.1007/978-1-61779-173-4_2.

PMID:
21863479
[PubMed - indexed for MEDLINE]
6.

Integrating functional genomics data.

Lee I, Marcotte EM.

Methods Mol Biol. 2008;453:267-78. doi: 10.1007/978-1-60327-429-6_14.

PMID:
18712309
[PubMed - indexed for MEDLINE]
7.

A practical guide to genome-scale metabolic models and their analysis.

Santos F, Boele J, Teusink B.

Methods Enzymol. 2011;500:509-32. doi: 10.1016/B978-0-12-385118-5.00024-4.

PMID:
21943912
[PubMed - indexed for MEDLINE]
8.

Yeast-based functional genomics and proteomics technologies: the first 15 years and beyond.

Suter B, Auerbach D, Stagljar I.

Biotechniques. 2006 May;40(5):625-44. Review.

PMID:
16708762
[PubMed - indexed for MEDLINE]
Free Article
9.

Yeast chemical genomics and drug discovery: an update.

Hoon S, St Onge RP, Giaever G, Nislow C.

Trends Pharmacol Sci. 2008 Oct;29(10):499-504. doi: 10.1016/j.tips.2008.07.006. Epub 2008 Aug 26. Review.

PMID:
18755517
[PubMed - indexed for MEDLINE]
10.

Towards a truly integrative biology through the functional genomics of yeast.

Delneri D, Brancia FL, Oliver SG.

Curr Opin Biotechnol. 2001 Feb;12(1):87-91. Review.

PMID:
11167079
[PubMed - indexed for MEDLINE]
11.

A genome-scale metabolic model of the lipid-accumulating yeast Yarrowia lipolytica.

Loira N, Dulermo T, Nicaud JM, Sherman DJ.

BMC Syst Biol. 2012 May 4;6:35. doi: 10.1186/1752-0509-6-35.

PMID:
22558935
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Genome-wide approaches to studying yeast chromatin modifications.

Schones DE, Cui K, Cuddapah S.

Methods Mol Biol. 2011;759:61-71. doi: 10.1007/978-1-61779-173-4_4.

PMID:
21863481
[PubMed - indexed for MEDLINE]
13.

A computational method to search for DNA structural motifs in functional genomic elements.

Parker SC, Harlap A, Tullius TD.

Methods Mol Biol. 2011;759:367-79. doi: 10.1007/978-1-61779-173-4_21.

PMID:
21863498
[PubMed - indexed for MEDLINE]
14.

Toward a functional analysis of the yeast genome through exhaustive two-hybrid screens.

Fromont-Racine M, Rain JC, Legrain P.

Nat Genet. 1997 Jul;16(3):277-82.

PMID:
9207794
[PubMed - indexed for MEDLINE]
15.

A genomic view of mRNA turnover in yeast.

Pérez-Ortín JE, Jordán-Pla A, Pelechano V.

C R Biol. 2011 Aug-Sep;334(8-9):647-54. doi: 10.1016/j.crvi.2011.05.013. Epub 2011 Jul 5. Review.

PMID:
21819946
[PubMed - indexed for MEDLINE]
16.

Computational analysis of the yeast proteome: understanding and exploiting functional specificity in genomic data.

Huttenhower C, Myers CL, Hibbs MA, Troyanskaya OG.

Methods Mol Biol. 2009;548:273-93. doi: 10.1007/978-1-59745-540-4_15.

PMID:
19521830
[PubMed - indexed for MEDLINE]
17.

Exploring genetic interactions and networks with yeast.

Boone C, Bussey H, Andrews BJ.

Nat Rev Genet. 2007 Jun;8(6):437-49. Review.

PMID:
17510664
[PubMed - indexed for MEDLINE]
18.

Genomic-wide methods to evaluate transcription rates in yeast.

García-Martínez J, Pelechano V, Pérez-Ortín JE.

Methods Mol Biol. 2011;734:25-44. doi: 10.1007/978-1-61779-086-7_2.

PMID:
21468983
[PubMed - indexed for MEDLINE]
19.

Standards, tools, and databases for the analysis of yeast 'omics data.

Kowald A, Wierling C.

Methods Mol Biol. 2011;759:345-65. doi: 10.1007/978-1-61779-173-4_20. Review.

PMID:
21863497
[PubMed - indexed for MEDLINE]
20.

Genome-scale gene function prediction using multiple sources of high-throughput data in yeast Saccharomyces cerevisiae.

Joshi T, Chen Y, Becker JM, Alexandrov N, Xu D.

OMICS. 2004 Winter;8(4):322-33.

PMID:
15703479
[PubMed - indexed for MEDLINE]

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