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Items: 1 to 20 of 466

1.

DNA methylation directly silences genes with non-CpG island promoters and establishes a nucleosome occupied promoter.

Han H, Cortez CC, Yang X, Nichols PW, Jones PA, Liang G.

Hum Mol Genet. 2011 Nov 15;20(22):4299-310. doi: 10.1093/hmg/ddr356. Epub 2011 Aug 11.

2.

DNA methylation determines nucleosome occupancy in the 5'-CpG islands of tumor suppressor genes.

Portela A, Liz J, Nogales V, SetiƩn F, Villanueva A, Esteller M.

Oncogene. 2013 Nov 21;32(47):5421-8. doi: 10.1038/onc.2013.162. Epub 2013 May 20.

3.

Genome-wide profiling of DNA methylation reveals a class of normally methylated CpG island promoters.

Shen L, Kondo Y, Guo Y, Zhang J, Zhang L, Ahmed S, Shu J, Chen X, Waterland RA, Issa JP.

PLoS Genet. 2007 Oct;3(10):2023-36. Epub 2007 Sep 10.

4.

Altered promoter nucleosome positioning is an early event in gene silencing.

Hesson LB, Sloane MA, Wong JW, Nunez AC, Srivastava S, Ng B, Hawkins NJ, Bourke MJ, Ward RL.

Epigenetics. 2014 Oct;9(10):1422-30. doi: 10.4161/15592294.2014.970077.

5.

Dissecting epigenetic silencing complexity in the mouse lung cancer suppressor gene Cadm1.

Reamon-Buettner SM, Borlak J.

PLoS One. 2012;7(6):e38531. doi: 10.1371/journal.pone.0038531. Epub 2012 Jun 6.

6.

Contrasting chromatin organization of CpG islands and exons in the human genome.

Choi JK.

Genome Biol. 2010;11(7):R70. doi: 10.1186/gb-2010-11-7-r70. Epub 2010 Jul 5.

7.

[Evolution pattern of the Runx3 gene 5'-CpG island methylation in human salivary gland adenoid cystic carcinoma].

Tan Z, Ling ZQ, Chen C, Xu JJ, Ge MH.

Zhonghua Zhong Liu Za Zhi. 2010 Dec;32(12):907-12. Chinese.

PMID:
21223798
8.

Aberrant methylation and silencing of ARHI, an imprinted tumor suppressor gene in which the function is lost in breast cancers.

Yuan J, Luo RZ, Fujii S, Wang L, Hu W, Andreeff M, Pan Y, Kadota M, Oshimura M, Sahin AA, Issa JP, Bast RC Jr, Yu Y.

Cancer Res. 2003 Jul 15;63(14):4174-80.

9.

An unmethylated 3' promoter-proximal region is required for efficient transcription initiation.

Appanah R, Dickerson DR, Goyal P, Groudine M, Lorincz MC.

PLoS Genet. 2007 Feb 16;3(2):e27. Epub 2007 Jan 2.

10.
11.

Genome-wide mapping of nucleosome positioning and DNA methylation within individual DNA molecules.

Kelly TK, Liu Y, Lay FD, Liang G, Berman BP, Jones PA.

Genome Res. 2012 Dec;22(12):2497-506. doi: 10.1101/gr.143008.112. Epub 2012 Sep 7.

14.

Spreading of methylation within RUNX3 CpG island in gastric cancer.

Homma N, Tamura G, Honda T, Matsumoto Y, Nishizuka S, Kawata S, Motoyama T.

Cancer Sci. 2006 Jan;97(1):51-6.

15.

Nucleosomes correlate with in vivo progression pattern of de novo methylation of p16 CpG islands in human gastric carcinogenesis.

Lu ZM, Zhou J, Wang X, Guan Z, Bai H, Liu ZJ, Su N, Pan K, Ji J, Deng D.

PLoS One. 2012;7(4):e35928. doi: 10.1371/journal.pone.0035928. Epub 2012 Apr 25. Erratum in: PLoS One. 2012;7(8). doi:10.1371/annotation/eb15769c-aa54-4963-8a13-1dd7e8242319.

16.

Gene reactivation by 5-aza-2'-deoxycytidine-induced demethylation requires SRCAP-mediated H2A.Z insertion to establish nucleosome depleted regions.

Yang X, Noushmehr H, Han H, Andreu-Vieyra C, Liang G, Jones PA.

PLoS Genet. 2012;8(3):e1002604. doi: 10.1371/journal.pgen.1002604. Epub 2012 Mar 29.

17.

Aberrant de novo methylation of the p16INK4A CpG island is initiated post gene silencing in association with chromatin remodelling and mimics nucleosome positioning.

Hinshelwood RA, Melki JR, Huschtscha LI, Paul C, Song JZ, Stirzaker C, Reddel RR, Clark SJ.

Hum Mol Genet. 2009 Aug 15;18(16):3098-109. doi: 10.1093/hmg/ddp251. Epub 2009 May 28.

19.

Role of nucleosomal occupancy in the epigenetic silencing of the MLH1 CpG island.

Lin JC, Jeong S, Liang G, Takai D, Fatemi M, Tsai YC, Egger G, Gal-Yam EN, Jones PA.

Cancer Cell. 2007 Nov;12(5):432-44.

20.

Critical regions and spreading of runt-related transcription factor-3 C-phosphate-G (CpG) island methylation in human salivary gland adenoid cystic carcinoma.

Ge MH, Chen C, Xu JJ, Ling ZQ.

Hum Pathol. 2011 Dec;42(12):1862-72. doi: 10.1016/j.humpath.2011.02.003. Epub 2011 Jun 11.

PMID:
21658745
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