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Items: 1 to 20 of 114

1.

Tapping natural reservoirs of homing endonucleases for targeted gene modification.

Takeuchi R, Lambert AR, Mak AN, Jacoby K, Dickson RJ, Gloor GB, Scharenberg AM, Edgell DR, Stoddard BL.

Proc Natl Acad Sci U S A. 2011 Aug 9;108(32):13077-82. doi: 10.1073/pnas.1107719108. Epub 2011 Jul 22.

2.

Isolation and characterization of new homing endonuclease specificities at individual target site positions.

Sussman D, Chadsey M, Fauce S, Engel A, Bruett A, Monnat R Jr, Stoddard BL, Seligman LM.

J Mol Biol. 2004 Sep 3;342(1):31-41.

PMID:
15313605
3.

Homing endonucleases: from microbial genetic invaders to reagents for targeted DNA modification.

Stoddard BL.

Structure. 2011 Jan 12;19(1):7-15. doi: 10.1016/j.str.2010.12.003. Review.

4.

A two-plasmid bacterial selection system for characterization and engineering of homing endonucleases.

Sun N, Zhao H.

Methods Mol Biol. 2014;1123:87-96. doi: 10.1007/978-1-62703-968-0_7.

PMID:
24510262
5.

Structural and functional characteristics of homing endonucleases.

Guhan N, Muniyappa K.

Crit Rev Biochem Mol Biol. 2003;38(3):199-248. Review.

PMID:
12870715
6.

Engineering of large numbers of highly specific homing endonucleases that induce recombination on novel DNA targets.

Arnould S, Chames P, Perez C, Lacroix E, Duclert A, Epinat JC, Stricher F, Petit AS, Patin A, Guillier S, Rolland S, Prieto J, Blanco FJ, Bravo J, Montoya G, Serrano L, Duchateau P, Pâques F.

J Mol Biol. 2006 Jan 20;355(3):443-58. Epub 2005 Nov 15.

PMID:
16310802
7.

Identification of conserved features of LAGLIDADG homing endonucleases.

Grishin A, Fonfara I, Alexeevski A, Spirin S, Zanegina O, Karyagina A, Alexeyevsky D, Wende W.

J Bioinform Comput Biol. 2010 Jun;8(3):453-69.

PMID:
20556856
8.

Generation of a nicking enzyme that stimulates site-specific gene conversion from the I-AniI LAGLIDADG homing endonuclease.

McConnell Smith A, Takeuchi R, Pellenz S, Davis L, Maizels N, Monnat RJ Jr, Stoddard BL.

Proc Natl Acad Sci U S A. 2009 Mar 31;106(13):5099-104. doi: 10.1073/pnas.0810588106. Epub 2009 Mar 10.

9.

Quantifying the information content of homing endonuclease target sites by single base pair profiling.

Friedman JI, Li H, Monnat RJ Jr.

Methods Mol Biol. 2014;1123:135-49. doi: 10.1007/978-1-62703-968-0_11.

PMID:
24510266
10.

Rapid evolution of the DNA-binding site in LAGLIDADG homing endonucleases.

Lucas P, Otis C, Mercier JP, Turmel M, Lemieux C.

Nucleic Acids Res. 2001 Feb 15;29(4):960-9.

11.

Homing endonuclease structure and function.

Stoddard BL.

Q Rev Biophys. 2005 Feb;38(1):49-95. Epub 2005 Dec 9. Review.

PMID:
16336743
12.

LAHEDES: the LAGLIDADG homing endonuclease database and engineering server.

Taylor GK, Petrucci LH, Lambert AR, Baxter SK, Jarjour J, Stoddard BL.

Nucleic Acids Res. 2012 Jul;40(Web Server issue):W110-6. doi: 10.1093/nar/gks365. Epub 2012 May 8.

13.

PCR-based bioprospecting for homing endonucleases in fungal mitochondrial rRNA genes.

Hafez M, Guha TK, Shen C, Sethuraman J, Hausner G.

Methods Mol Biol. 2014;1123:37-53. doi: 10.1007/978-1-62703-968-0_3.

PMID:
24510258
14.

Engineering and flow-cytometric analysis of chimeric LAGLIDADG homing endonucleases from homologous I-OnuI-family enzymes.

Baxter SK, Scharenberg AM, Lambert AR.

Methods Mol Biol. 2014;1123:191-221. doi: 10.1007/978-1-62703-968-0_14.

15.

Coevolution of a homing endonuclease and its host target sequence.

Scalley-Kim M, McConnell-Smith A, Stoddard BL.

J Mol Biol. 2007 Oct 5;372(5):1305-19. Epub 2007 Aug 2.

16.

[TALE nuclease engineering and targeted genome modification].

Shen Y, Xiao A, Huang P, Wang WY, Zhu ZY, Zhang B.

Yi Chuan. 2013 Apr;35(4):395-409. Review. Chinese.

PMID:
23659930
17.

Design, activity, and structure of a highly specific artificial endonuclease.

Chevalier BS, Kortemme T, Chadsey MS, Baker D, Monnat RJ, Stoddard BL.

Mol Cell. 2002 Oct;10(4):895-905.

18.

Engineering of customized meganucleases via in vitro compartmentalization and in cellulo optimization.

Takeuchi R, Choi M, Stoddard BL.

Methods Mol Biol. 2015;1239:105-32. doi: 10.1007/978-1-4939-1862-1_6.

19.

Identification and analysis of genomic homing endonuclease target sites.

Pellenz S, Monnat RJ Jr.

Methods Mol Biol. 2014;1123:245-64. doi: 10.1007/978-1-62703-968-0_16.

PMID:
24510271
20.

Directed evolution of homing endonuclease I-SceI with altered sequence specificity.

Chen Z, Wen F, Sun N, Zhao H.

Protein Eng Des Sel. 2009 Apr;22(4):249-56. doi: 10.1093/protein/gzp001. Epub 2009 Jan 28.

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