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Items: 1 to 20 of 100

1.

Enhancers: from developmental genetics to the genetics of common human disease.

Williamson I, Hill RE, Bickmore WA.

Dev Cell. 2011 Jul 19;21(1):17-9. doi: 10.1016/j.devcel.2011.06.008.

2.

Chromatin stretch enhancer states drive cell-specific gene regulation and harbor human disease risk variants.

Parker SC, Stitzel ML, Taylor DL, Orozco JM, Erdos MR, Akiyama JA, van Bueren KL, Chines PS, Narisu N; NISC Comparative Sequencing Program, Black BL, Visel A, Pennacchio LA, Collins FS; National Institutes of Health Intramural Sequencing Center Comparative Sequencing Program Authors; NISC Comparative Sequencing Program Authors.

Proc Natl Acad Sci U S A. 2013 Oct 29;110(44):17921-6. doi: 10.1073/pnas.1317023110. Epub 2013 Oct 14.

3.

What are super-enhancers?

Pott S, Lieb JD.

Nat Genet. 2015 Jan;47(1):8-12. doi: 10.1038/ng.3167.

PMID:
25547603
4.

Eukaryotic enhancers: common features, regulation, and participation in diseases.

Erokhin M, Vassetzky Y, Georgiev P, Chetverina D.

Cell Mol Life Sci. 2015 Jun;72(12):2361-75. doi: 10.1007/s00018-015-1871-9. Epub 2015 Feb 26. Review.

PMID:
25715743
5.

Genomic views of distant-acting enhancers.

Visel A, Rubin EM, Pennacchio LA.

Nature. 2009 Sep 10;461(7261):199-205. doi: 10.1038/nature08451. Review.

6.

Many human accelerated regions are developmental enhancers.

Capra JA, Erwin GD, McKinsey G, Rubenstein JL, Pollard KS.

Philos Trans R Soc Lond B Biol Sci. 2013 Nov 11;368(1632):20130025. doi: 10.1098/rstb.2013.0025. Print 2013 Dec 19.

7.

An atlas of active enhancers across human cell types and tissues.

Andersson R, Gebhard C, Miguel-Escalada I, Hoof I, Bornholdt J, Boyd M, Chen Y, Zhao X, Schmidl C, Suzuki T, Ntini E, Arner E, Valen E, Li K, Schwarzfischer L, Glatz D, Raithel J, Lilje B, Rapin N, Bagger FO, Jørgensen M, Andersen PR, Bertin N, Rackham O, Burroughs AM, Baillie JK, Ishizu Y, Shimizu Y, Furuhata E, Maeda S, Negishi Y, Mungall CJ, Meehan TF, Lassmann T, Itoh M, Kawaji H, Kondo N, Kawai J, Lennartsson A, Daub CO, Heutink P, Hume DA, Jensen TH, Suzuki H, Hayashizaki Y, Müller F; FANTOM Consortium, Forrest AR, Carninci P, Rehli M, Sandelin A.

Nature. 2014 Mar 27;507(7493):455-61. doi: 10.1038/nature12787.

PMID:
24670763
8.

Conserved and non-conserved enhancers direct tissue specific transcription in ancient germ layer specific developmental control genes.

Chatterjee S, Bourque G, Lufkin T.

BMC Dev Biol. 2011 Oct 20;11:63. doi: 10.1186/1471-213X-11-63.

9.

Characterization of genome-wide enhancer-promoter interactions reveals co-expression of interacting genes and modes of higher order chromatin organization.

Chepelev I, Wei G, Wangsa D, Tang Q, Zhao K.

Cell Res. 2012 Mar;22(3):490-503. doi: 10.1038/cr.2012.15. Epub 2012 Jan 24.

10.

Functional analysis of APOE locus genetic variation implicates regional enhancers in the regulation of both TOMM40 and APOE.

Bekris LM, Lutz F, Yu CE.

J Hum Genet. 2012 Jan;57(1):18-25. doi: 10.1038/jhg.2011.123. Epub 2011 Nov 17.

11.

Enhancer turnover and conserved regulatory function in vertebrate evolution.

Domené S, Bumaschny VF, de Souza FS, Franchini LF, Nasif S, Low MJ, Rubinstein M.

Philos Trans R Soc Lond B Biol Sci. 2013 Nov 11;368(1632):20130027. doi: 10.1098/rstb.2013.0027. Print 2013 Dec 19.

12.

Reverse-engineering a transcriptional enhancer: a case study in Drosophila.

Johnson LA, Zhao Y, Golden K, Barolo S.

Tissue Eng Part A. 2008 Sep;14(9):1549-59. doi: 10.1089/ten.tea.2008.0074.

13.

Functional autonomy of distant-acting human enhancers.

Visel A, Akiyama JA, Shoukry M, Afzal V, Rubin EM, Pennacchio LA.

Genomics. 2009 Jun;93(6):509-13. doi: 10.1016/j.ygeno.2009.02.002. Epub 2009 Mar 5.

15.

Integrating diverse datasets improves developmental enhancer prediction.

Erwin GD, Oksenberg N, Truty RM, Kostka D, Murphy KK, Ahituv N, Pollard KS, Capra JA.

PLoS Comput Biol. 2014 Jun 26;10(6):e1003677. doi: 10.1371/journal.pcbi.1003677. eCollection 2014 Jun.

16.

Topology of mammalian developmental enhancers and their regulatory landscapes.

de Laat W, Duboule D.

Nature. 2013 Oct 24;502(7472):499-506. doi: 10.1038/nature12753. Review.

PMID:
24153303
17.

Enhancer-core-promoter specificity separates developmental and housekeeping gene regulation.

Zabidi MA, Arnold CD, Schernhuber K, Pagani M, Rath M, Frank O, Stark A.

Nature. 2015 Feb 26;518(7540):556-9. doi: 10.1038/nature13994. Epub 2014 Dec 15.

PMID:
25517091
18.

Partially redundant enhancers cooperatively maintain Mammalian pomc expression above a critical functional threshold.

Lam DD, de Souza FS, Nasif S, Yamashita M, López-Leal R, Otero-Corchon V, Meece K, Sampath H, Mercer AJ, Wardlaw SL, Rubinstein M, Low MJ.

PLoS Genet. 2015 Feb 11;11(2):e1004935. doi: 10.1371/journal.pgen.1004935. eCollection 2015 Feb. Erratum in: PLoS Genet. 2015 Apr;11(4):e1005133.

19.
20.

Genome-wide quantitative enhancer activity maps identified by STARR-seq.

Arnold CD, Gerlach D, Stelzer C, Boryń ŁM, Rath M, Stark A.

Science. 2013 Mar 1;339(6123):1074-7. doi: 10.1126/science.1232542. Epub 2013 Jan 17.

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