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Items: 1 to 20 of 129

1.

H3K4 trimethylation by Set1 promotes efficient termination by the Nrd1-Nab3-Sen1 pathway.

Terzi N, Churchman LS, Vasiljeva L, Weissman J, Buratowski S.

Mol Cell Biol. 2011 Sep;31(17):3569-83. doi: 10.1128/MCB.05590-11. Epub 2011 Jun 27.

2.

Transcriptome-wide binding sites for components of the Saccharomyces cerevisiae non-poly(A) termination pathway: Nrd1, Nab3, and Sen1.

Creamer TJ, Darby MM, Jamonnak N, Schaughency P, Hao H, Wheelan SJ, Corden JL.

PLoS Genet. 2011 Oct;7(10):e1002329. doi: 10.1371/journal.pgen.1002329. Epub 2011 Oct 20.

3.

Interactions of Sen1, Nrd1, and Nab3 with multiple phosphorylated forms of the Rpb1 C-terminal domain in Saccharomyces cerevisiae.

Chinchilla K, Rodriguez-Molina JB, Ursic D, Finkel JS, Ansari AZ, Culbertson MR.

Eukaryot Cell. 2012 Apr;11(4):417-29. doi: 10.1128/EC.05320-11. Epub 2012 Jan 27.

4.

The role of Ctk1 kinase in termination of small non-coding RNAs.

Lenstra TL, Tudek A, Clauder S, Xu Z, Pachis ST, van Leenen D, Kemmeren P, Steinmetz LM, Libri D, Holstege FC.

PLoS One. 2013 Dec 4;8(12):e80495. doi: 10.1371/journal.pone.0080495. eCollection 2013.

5.

The exosome component Rrp6 is required for RNA polymerase II termination at specific targets of the Nrd1-Nab3 pathway.

Fox MJ, Gao H, Smith-Kinnaman WR, Liu Y, Mosley AL.

PLoS Genet. 2015 Feb 13;11(2):e1004999. doi: 10.1371/journal.pgen.1004999. eCollection 2015.

6.

The Nrd1-Nab3-Sen1 termination complex interacts with the Ser5-phosphorylated RNA polymerase II C-terminal domain.

Vasiljeva L, Kim M, Mutschler H, Buratowski S, Meinhart A.

Nat Struct Mol Biol. 2008 Aug;15(8):795-804. doi: 10.1038/nsmb.1468. Epub 2008 Jul 27.

7.

The Glc7 phosphatase subunit of the cleavage and polyadenylation factor is essential for transcription termination on snoRNA genes.

Nedea E, Nalbant D, Xia D, Theoharis NT, Suter B, Richardson CJ, Tatchell K, Kislinger T, Greenblatt JF, Nagy PL.

Mol Cell. 2008 Mar 14;29(5):577-87. doi: 10.1016/j.molcel.2007.12.031.

8.

Histone H3 lysine 4 hypermethylation prevents aberrant nucleosome remodeling at the PHO5 promoter.

Wang SS, Zhou BO, Zhou JQ.

Mol Cell Biol. 2011 Aug;31(15):3171-81. doi: 10.1128/MCB.05017-11. Epub 2011 Jun 6.

9.

Yeast Nrd1, Nab3, and Sen1 transcriptome-wide binding maps suggest multiple roles in post-transcriptional RNA processing.

Jamonnak N, Creamer TJ, Darby MM, Schaughency P, Wheelan SJ, Corden JL.

RNA. 2011 Nov;17(11):2011-25. doi: 10.1261/rna.2840711. Epub 2011 Sep 27.

10.

Kinetic competition between RNA Polymerase II and Sen1-dependent transcription termination.

Hazelbaker DZ, Marquardt S, Wlotzka W, Buratowski S.

Mol Cell. 2013 Jan 10;49(1):55-66. doi: 10.1016/j.molcel.2012.10.014. Epub 2012 Nov 21.

11.

A network of interdependent molecular interactions describes a higher order Nrd1-Nab3 complex involved in yeast transcription termination.

Loya TJ, O'Rourke TW, Degtyareva N, Reines D.

J Biol Chem. 2013 Nov 22;288(47):34158-67. doi: 10.1074/jbc.M113.516765. Epub 2013 Oct 7.

12.

A Requirement for the Saccharomyces cerevisiae Paf1 complex in snoRNA 3' end formation.

Sheldon KE, Mauger DM, Arndt KM.

Mol Cell. 2005 Oct 28;20(2):225-36.

13.

Transcription termination and the control of the transcriptome: why, where and how to stop.

Porrua O, Libri D.

Nat Rev Mol Cell Biol. 2015 Mar;16(3):190-202. doi: 10.1038/nrm3943. Epub 2015 Feb 4. Review.

PMID:
25650800
14.

Termination of cryptic unstable transcripts is directed by yeast RNA-binding proteins Nrd1 and Nab3.

Arigo JT, Eyler DE, Carroll KL, Corden JL.

Mol Cell. 2006 Sep 15;23(6):841-51.

15.

Distinct pathways for snoRNA and mRNA termination.

Kim M, Vasiljeva L, Rando OJ, Zhelkovsky A, Moore C, Buratowski S.

Mol Cell. 2006 Dec 8;24(5):723-34.

16.

Role of histone modifications and early termination in pervasive transcription and antisense-mediated gene silencing in yeast.

Castelnuovo M, Zaugg JB, Guffanti E, Maffioletti A, Camblong J, Xu Z, Clauder-M√ľnster S, Steinmetz LM, Luscombe NM, Stutz F.

Nucleic Acids Res. 2014 Apr;42(7):4348-62. doi: 10.1093/nar/gku100. Epub 2014 Feb 4.

17.

Dimethylation of H3K4 by Set1 recruits the Set3 histone deacetylase complex to 5' transcribed regions.

Kim T, Buratowski S.

Cell. 2009 Apr 17;137(2):259-72. doi: 10.1016/j.cell.2009.02.045.

18.

The Saccharomyces cerevisiae Nrd1-Nab3 transcription termination pathway acts in opposition to Ras signaling and mediates response to nutrient depletion.

Darby MM, Serebreni L, Pan X, Boeke JD, Corden JL.

Mol Cell Biol. 2012 May;32(10):1762-75. doi: 10.1128/MCB.00050-12. Epub 2012 Mar 19.

19.

Pcf11 orchestrates transcription termination pathways in yeast.

Grzechnik P, Gdula MR, Proudfoot NJ.

Genes Dev. 2015 Apr 15;29(8):849-61. doi: 10.1101/gad.251470.114. Epub 2015 Apr 15.

20.

The RNA polymerase II C-terminal domain-interacting domain of yeast Nrd1 contributes to the choice of termination pathway and couples to RNA processing by the nuclear exosome.

Heo DH, Yoo I, Kong J, Lidschreiber M, Mayer A, Choi BY, Hahn Y, Cramer P, Buratowski S, Kim M.

J Biol Chem. 2013 Dec 20;288(51):36676-90. doi: 10.1074/jbc.M113.508267. Epub 2013 Nov 6.

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